Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1758 ATGATGGATTCTCCTGTTCTTATGGGTACTGCAATTGTGGAGCCTCGTAGTGGAATGGAATTTGACTCTCATGAGGCTGCATATGCATTTTACAAGGAATACGCCAAGTCTGCAGGCTTCGGTACTGCCAAGTTGAGCAGCCGTCGGTCTAGGGCATCCAGGGAATTCATTGATGCCAAATTTTCGTGTATTAGGTATGGTAATAAGCAGCAATCTGATGATGCCATTAATCCGCGCCCTTCTCCGAAAATTGGTTGTAAAGCGAGCATGCATGTGAAGAGAAGACAAGATGGTAAGTGGTATGTCTATAGCTTTGTGAAGGAGCATAACCATGAGCTCTTACCTGCTCAAGCTCATTTCTTTCGGAGTCATAGGAGTTCTGATCCACTAAAACAGTACAAAGTAATTCTTGAAGACAGGCATGAAGAGGAAGCCAAAGCAAATTTTGATGCATGGCATGAAACACCTGAGTTGAAGTCTCCTTCCCCTTTTGAGAAACAAATGCTATTAGTTTACACACATGAAATTTACAAAAAGTTCCAGGCTGAGGTTTTGGGTGCAGTTGCTTGCCATCTTAAGAAAGAAAATGATGGCGTGACTGCAACTTATACTGTGAAAGATTTTGAAAATAATGAAACCTATATGGTCGAATGGAACACATCAAATTCTGATATATCTTGTTCATGTCGCTCATTTGAATATAAAGGCTATCTCTGTAGACATGCTATTGTTGTTCTACAAATGTCTGGCGTCTTCAGCATCCCACCAAAGTATATATTGCAAAGGTGGACAAATGCTGCTATGAGCAGGCATCCTATCAGTGAAAAGTTGGAAGAGGTTCAATCCAAGGTCCGACGTTTCAATGACTTGTGTCGACGAGCCATAATTTTGGGTGAAGAAGGTTCTTTGTCACAGGAAAGTTACTATTTTGCTTTAGGTGCTATAAGTGAAGCTTTCAAGCAATGTACAAATTTGAAGAACCCTGTTGAGAATGATACAAGACCTGATGCCTCAGCTATCCATGTTGTATGCAATGTTGAAGAGTATCAGCCTATTATTACATCTAACAATAAGGTCCCTGATCCAAAAATGAATACAAGTAATAAGGCTGTGAGGACTATTGTCTCCGGTAGGGATCTAGGAAGCACAGAAAATAGTGAAGGAAATAAAGAAAAGGTTCCTCATCTTGAAGCAGTTAGTGGAAAAGATGGTTTTCAACAAATGGGGCCGGCCGATCTGTCGTCACATAATGTTGTCATGCCTATGCAGTTTCATAGTATGGTGCCAGCTCTGTTCCACAATCACAATGTTTCGCCGACACCGTTTCATACCGCAGGTGCAGCTTCAACTCATGTGCATGAGAATCGTCTTCCTCGATAG 1380 0.4145 MMDSPVLMGTAIVEPRSGMEFDSHEAAYAFYKEYAKSAGFGTAKLSSRRSRASREFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASMHVKRRQDGKWYVYSFVKEHNHELLPAQAHFFRSHRSSDPLKQYKVILEDRHEEEAKANFDAWHETPELKSPSPFEKQMLLVYTHEIYKKFQAEVLGAVACHLKKENDGVTATYTVKDFENNETYMVEWNTSNSDISCSCRSFEYKGYLCRHAIVVLQMSGVFSIPPKYILQRWTNAAMSRHPISEKLEEVQSKVRRFNDLCRRAIILGEEGSLSQESYYFALGAISEAFKQCTNLKNPVENDTRPDASAIHVVCNVEEYQPIITSNNKVPDPKMNTSNKAVRTIVSGRDLGSTENSEGNKEKVPHLEAVSGKDGFQQMGPADLSSHNVVMPMQFHSMVPALFHNHNVSPTPFHTAGAASTHVHENRLPR* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1758 459 ProSiteProfiles Zinc finger SWIM-type profile. 214 250 IPR007527 GO:0008270
Aev10g1758 459 Pfam FAR1 DNA-binding domain 30 115 IPR004330 -
Aev10g1758 459 Pfam SWIM zinc finger 220 248 IPR007527 GO:0008270
Aev10g1758 459 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 3 122 IPR031052 GO:0006355
Aev10g1758 459 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 131 415 IPR031052 GO:0006355
Aev10g1758 459 SMART 26again6 225 252 IPR006564 GO:0008270
Aev10g1758 459 MobiDBLite consensus disorder prediction 376 395 - -
Aev10g1758 459 PANTHER PROTEIN FAR1-RELATED SEQUENCE 4 3 122 - -
Aev10g1758 459 PANTHER PROTEIN FAR1-RELATED SEQUENCE 4 131 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1758 Aev-Chr10 19622844 19625984 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev10g1758 FAR1 1.5e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1758 - - adu:107461496 530.406