Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1757 ATGGAGTCAGATCTTCAGCAACCGAATTCTTCTGGGCTGACAAGATACCGATCGGCCCCAAGCTCCTACTTCAACAACATAATCGACCGTGAGTTCTACGAGCACATTTTCAATAAACCCTCAAGCCCCGAAACAGAGCGAGTTTTCTCCAGGTTCATGAATAGTCTCCGTGATGATGGTGCACCAGAAGATTCACTCGCCCAGAATTTCTCAGCCGGTTCTGCGGTCAAGGAAGAGAATATTAGTCTGCAGGATCAGGGTAGGAATGAACAAGTGGTTCTCCAACAGCAGCAGCAGAACAATATGAATAACTACAACACTGAGACTCATGGTTTTAACTACCAAAGCACAGCGAGACCACCTTTGCCGAATCAGAACCTCAACTCAGGTATGGAAGGAGGAGGGTATTCTCTGGGAGGAGTGAATCGGTTGCCTCAGATGAAAACTGGTGGTGGAAATCATTCTACTCTTGCCAGGCATAACAGCTCTCCTGCAGGACTATTTTCCCAAATAACCATTGAAAATGGGTATGTTGGTATGAGAGGCATAGGAACTATAGCGGCAGTTAACAACAGTATAGAAGGAGCAAAGTTTTCTAGAAGTGGAAGGAGGTTGAAGAATAATGTTCATCCACAAAGCTACTCATCAAGGGGGCTAATGTCGTCAATAGCTGAAATTGGGGGCAAGGACAACAGAGAGGACAATCAAGAAGGTGAAGCTTTTGGTGAAAATAGCGATTATGTCACAGATTTCCCACCCTGGGATGATTCTGTAGCCATGAATGACAGCAATGTTGCTGGTCTAAAAAGATTCACTAGTGATGATGCAAGACCTTTTTCTGGTTTAAATGCTGCTGAGACTCAGAATGAAACAAGAGGACAGGGTCCTGCTGCTCCTTTGGCTCATCACTTGAGTCTGCCAAATACTTCAGCTGAAATGGCAGCCATTGAGAAGTTCCTTCACTTCTCAGATTCTGTTCCCTGCAAAATCCGTGCCAAGAGGGGCTGTGCCACTCACCCAAGAAGTATTGCTGAGAGGGTCAGAAGAACCAAAATTAGTGAGCGTATGAGGAAACTGCAAGATTTGGTCCCTAACATGGACAAGCAAACAAACACAGCAGACATGTTGGATTTGGCTGTCGATTACATCAAAGACCTTCAAAAGCAAGTCCAGACCCTTTCAGACTGTCACGCTAAGTGTACGTGTTCGCCCAACCCACAGCAATAA 1227 0.4548 MESDLQQPNSSGLTRYRSAPSSYFNNIIDREFYEHIFNKPSSPETERVFSRFMNSLRDDGAPEDSLAQNFSAGSAVKEENISLQDQGRNEQVVLQQQQQNNMNNYNTETHGFNYQSTARPPLPNQNLNSGMEGGGYSLGGVNRLPQMKTGGGNHSTLARHNSSPAGLFSQITIENGYVGMRGIGTIAAVNNSIEGAKFSRSGRRLKNNVHPQSYSSRGLMSSIAEIGGKDNREDNQEGEAFGENSDYVTDFPPWDDSVAMNDSNVAGLKRFTSDDARPFSGLNAAETQNETRGQGPAAPLAHHLSLPNTSAEMAAIEKFLHFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQVQTLSDCHAKCTCSPNPQQ* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1757 408 Gene3D - 337 403 IPR036638 GO:0046983
Aev10g1757 408 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 6 405 - -
Aev10g1757 408 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 6 405 - -
Aev10g1757 408 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 339 401 IPR036638 GO:0046983
Aev10g1757 408 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 336 386 IPR011598 GO:0046983
Aev10g1757 408 SMART finulus 342 392 IPR011598 GO:0046983
Aev10g1757 408 Pfam Helix-loop-helix DNA-binding domain 341 387 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1757 Aev-Chr10 19612278 19614493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1757 6 403 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 38.631 1.80e-70 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev10g1757 HLH 5.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1757 - - gmx:100805812 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1757 10 19612278 19614493 Aev10g1757 10 19612278 19614493 ECH
Aev10g1757 10 19612278 19614493 Aev04g3218 04 31496560 31499827 ECH
Aev06g1268 06 8430301 8433671 Aev10g1757 10 19612278 19614493 ECH
Aev02g1554 02 17201032 17205301 Aev10g1757 10 19612278 19614493 ECH