Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1744 ATGGATTCCTCCGACGATATGCACGACGCAAACGACGTTGAGTCCCTCGACGACGATTTCTACAGTGGCGAGACCGAGGATGCTCCCATGGATTACTACAGCGACTACGACGACGAGGCCGACGATTACTTTGACGATGCCGACGATTCCGATAGGGTTGAGTCTCGTCGCCCCGAGCAAAATTTTACCATATTGAAGGAATCGGATATCCAGCAAAGGCAGGAAGATGACATCACTAGAGTAGCAACAGTTCTTTCCATATCACGAGTTGCTGCTAGTATCTTGCTTCGTCATTACAATTGGAGTGTTAGTAAAGTGCATGATGCATGGTTTGCTGACGAAGATCATGTCAGATTAACTGTTGGTTTGTTGGAGAAGCCTGTTTTCCAGCATTCTAATCCTAGAGAGCTCACTTGTGGCATCTGCTTTGATACTTATCCTCGTACCAAGATTGAAACTGCTACTTGTGGTCATCCCTACTGTTATTCTTGCTGGGCTGGGTATATTGGCACATCAATTAATGATGGTCCTGGATGTTTGATGCTGAGATGTCCTGATCCTGCTTGTGGTGCTGCTGTTGATCAAAACATGATTAATCTCTTAGCATCTGATGAAGATAAAGAGAAGTATTGCCGTTACCTTCTTAGGTCATATATCGAAGACAATAAGAAGACCAAGTGGTGTCCTGCTCCGGGCTGTGAATATGCAGTTAATTTTGATGCTGGCAGTGGAAATTATGATGTATCTTGCCTCTGTTCATATAGCTTTTGCTGGAATTGCACTGAAGAGGCTCACCGTCCCGTGGATTGTGGCACCGTGTCAAAATGGATTCTGAAAAACAGTGCGGAATCTGAAAACATGAACTGGATTCTTGCAAACTCAAAGCCATGCCCCAAGTGCAAGAGACCCATTGAAAAAAACCAAGGGTGCATGCACATGACATGCACTCCACCTTGTAAATTCGAATTTTGTTGGCTTTGCCTTGGTGCGTGGTCAGATCATGGTGAAAGGACTGGCGGTTTCTATGCTTGCAATCGGTACGAGGCAGCTAAACAGGAGGGAGTGTATGATGAAACTGAAAGAAGAAGAGAAATGGCAAAAAATTCGTTGGAGAGGTACACACATTATTATGAGCGGTGGGCCAGCAATCAATCTTCAAGGCAAAAGGCACTTGCAGATCTACACCTTATGCAAACTGTTCATATTGAGAAGCTTAGTGACACACAATGCCAGCCCGAGTCACAGCTCAAGTTCATAACTGAGGCTTGGCTGCAGATAGTTGAATGTAGGCGGGTGCTAAAGTGGACATATGCTTATGGGTACTATTTACCTGAGCATGAACATGCCAAAAAACAGTTCTTTGAGTACTTACAAGGTGAAGCAGAATCTGGTTTGGAGAGACTTCATCAATGTGCTGAGAAGGAGCTACAACTTTTCCTTAATGCTGATGGCCCATCAAAAGAATTCAATGACTTCCGCACAAAACTAGCTGGATTGACCAGCGTGACGAGAAATTACTTTGAGAATTTGGTTAGGGCATTAGAGAATGGTTTATCTGATGTGGATAGTAATGGAGCTGCTTCCAGCAAAGCGACGAGCTCCAAGAATGCTGCAGGGAGCAGCAAGGGTAGAGGTGGAAGAGGAAAGGGAACTATCCGAGCTAGTATGTCTGGCAGAATGTCTGATGATCATTGGTCTTGTGAGCAGTGTACCTATGCAAATGCAAAATCTGCCACCGCATGCCAGATGTGCAACCAACCGCGTCGATGA 1770 0.4503 MDSSDDMHDANDVESLDDDFYSGETEDAPMDYYSDYDDEADDYFDDADDSDRVESRRPEQNFTILKESDIQQRQEDDITRVATVLSISRVAASILLRHYNWSVSKVHDAWFADEDHVRLTVGLLEKPVFQHSNPRELTCGICFDTYPRTKIETATCGHPYCYSCWAGYIGTSINDGPGCLMLRCPDPACGAAVDQNMINLLASDEDKEKYCRYLLRSYIEDNKKTKWCPAPGCEYAVNFDAGSGNYDVSCLCSYSFCWNCTEEAHRPVDCGTVSKWILKNSAESENMNWILANSKPCPKCKRPIEKNQGCMHMTCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYEAAKQEGVYDETERRREMAKNSLERYTHYYERWASNQSSRQKALADLHLMQTVHIEKLSDTQCQPESQLKFITEAWLQIVECRRVLKWTYAYGYYLPEHEHAKKQFFEYLQGEAESGLERLHQCAEKELQLFLNADGPSKEFNDFRTKLAGLTSVTRNYFENLVRALENGLSDVDSNGAASSKATSSKNAAGSSKGRGGRGKGTIRASMSGRMSDDHWSCEQCTYANAKSATACQMCNQPRR* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1744 589 Pfam Zinc finger, C3HC4 type (RING finger) 139 170 IPR018957 GO:0046872
Aev10g1744 589 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 221 IPR013083 -
Aev10g1744 589 Gene3D - 266 521 - -
Aev10g1744 589 Pfam Ariadne domain 357 518 IPR045840 -
Aev10g1744 589 Gene3D - 559 589 - -
Aev10g1744 589 MobiDBLite consensus disorder prediction 1 60 - -
Aev10g1744 589 CDD RING-HC_RBR_TRIAD1_like 139 189 - -
Aev10g1744 589 SUPERFAMILY RING/U-box 134 220 - -
Aev10g1744 589 SMART zf_4 563 587 IPR001876 -
Aev10g1744 589 ProSiteProfiles Zinc finger RING-type profile. 139 183 IPR001841 -
Aev10g1744 589 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 15 537 IPR031127 GO:0004842|GO:0016567
Aev10g1744 589 ProSiteProfiles Zinc finger RanBP2 type profile. 561 589 IPR001876 -
Aev10g1744 589 SMART ibrneu5 283 344 IPR002867 -
Aev10g1744 589 SMART ibrneu5 208 270 IPR002867 -
Aev10g1744 589 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 15 537 - -
Aev10g1744 589 MobiDBLite consensus disorder prediction 11 48 - -
Aev10g1744 589 MobiDBLite consensus disorder prediction 522 562 - -
Aev10g1744 589 Pfam IBR domain, a half RING-finger domain 208 270 IPR002867 -
Aev10g1744 589 Pfam IBR domain, a half RING-finger domain 287 335 IPR002867 -
Aev10g1744 589 ProSiteProfiles TRIAD supradomain profile. 135 348 IPR044066 -
Aev10g1744 589 SUPERFAMILY RING/U-box 289 337 - -
Aev10g1744 589 ProSitePatterns Zinc finger RanBP2-type signature. 565 584 IPR001876 -
Aev10g1744 589 SUPERFAMILY RING/U-box 208 277 - -
Aev10g1744 589 SUPERFAMILY Ran binding protein zinc finger-like 562 588 IPR036443 -
Aev10g1744 589 MobiDBLite consensus disorder prediction 522 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1744 Aev-Chr10 19492401 19496993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1744 17 588 ARIADNE family AT1G65430 70.840 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1744 K11968 - gmx:100810427 1100.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1744 10 19492401 19496993 Aev10g1744 10 19492401 19496993 ECH
Aev10g1744 10 19492401 19496993 Aev04g3240 04 31669925 31674639 PCT