Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1728 ATGAAGATTCAGTGTGATGTGTGTGAAAAGGCTCCGGCAACTGTGATTTGTTGTGCGGATGAAGCAGCTTTGTGTGCAAAATGTGATGTTGAAGTTCATGCTGCTAACAAGCTTGCAAGCAAGCATCAGAGGCTGCTTCTTCAATGCCTTTCAAACAAGCTTCCAAAATGTGACATATGCCAAGACAAGCCAGCTTTCATATTTTGTGTTGAAGACAGAGCTCTCTTCTGTCAGGACTGCGATGAACCAATTCACTCAGCTGGAAGCCTCTCCGCGAACCACCAGAGATTCCTTGCTACCGGAATCCGAGTGGCCATGAATTCTTCTTGCACCAAAGACAATGAAAAAAATCACTTGGAGCCACCACCAAATGATAGAACTAATGCAGCTGATAATAATAAGAATCCACAACAAGTTTGTGTGGAAGTTCCTCCTCAGCAAGTGCCTAATTTCCCATCCTCTTGGGCTGTTGATGACTTATTGGAACTAACAGGCTTTGAATCCCCAGACAAAAAGGAACCCCTGCAGTTTGGAGAATTGGAATGGCTTGAAGATGTTGGTCTTTTTGGTGAACAATTTCCTCAGGAAGCATTAGCTGCTGCTGAAGTTCCTCAGCTTCCGGTATCGCATATCAGCCACAATGTCTCTTCATACAGAACCTCCAAGTCCTATATGTCTCACAAAAAGCCTAGGATTGAAGTCATAGAAGATGATGATGATGAGTACTTCACAGTGCCTGATCTTGGTTGA 750 0.4387 MKIQCDVCEKAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPKCDICQDKPAFIFCVEDRALFCQDCDEPIHSAGSLSANHQRFLATGIRVAMNSSCTKDNEKNHLEPPPNDRTNAADNNKNPQQVCVEVPPQQVPNFPSSWAVDDLLELTGFESPDKKEPLQFGELEWLEDVGLFGEQFPQEALAAAEVPQLPVSHISHNVSSYRTSKSYMSHKKPRIEVIEDDDDEYFTVPDLG* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1728 249 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Aev10g1728 249 SMART bboxneu5 4 47 IPR000315 GO:0008270
Aev10g1728 249 SMART bboxneu5 52 99 IPR000315 GO:0008270
Aev10g1728 249 PANTHER B-BOX ZINC FINGER PROTEIN 24 1 249 - -
Aev10g1728 249 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Aev10g1728 249 CDD Bbox1_BBX-like 5 47 - -
Aev10g1728 249 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 249 - -
Aev10g1728 249 Pfam B-box zinc finger 52 95 IPR000315 GO:0008270
Aev10g1728 249 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Aev10g1728 249 Gene3D Classic Zinc Finger 1 93 - -
Aev10g1728 249 CDD Bbox1_BBX-like 56 98 - -
Aev10g1728 249 MobiDBLite consensus disorder prediction 112 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1728 Aev-Chr10 19414002 19415513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1728 1 171 Orphan Transcription Factor Family AT1G06040 62.791 7.28e-68 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Aev10g1728 zf-B_box 8.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1728 - - gmx:100814727 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1728 10 19414002 19415513 Aev10g1728 10 19414002 19415513 ECH
Aev10g1728 10 19414002 19415513 Aev04g3257 04 31796547 31798928 PCT