Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1718 ATGGAAAACCACATAAGCCCTTACACTTCAAGAAAACCAACACAACAACACTTCAACAACAATCATCATAATGATCATAGCCACAACAACACCTCCACAACAAGCCGTTCTTCAGATTATTCTGCAGGTGATCAACAGCAGTATGATGATGGTAAATGGTCCTGCAAGCTTCTGAGAGAGTGTGCCAGAGCAATAACAGAGAGAGACTCAACAAAGATCCAACACCTCCTCTGGATGCTCAACGAACTCGCTTCCCCTTATGGCGATTTGGATCAGAAACTTGCCTCTTACTTCCTCCAAGCTCTATTCTGCAAAGCCACCGAATCAGGCCATAGATGCTACAACACCCTCACCTCTGTTGCAGAGAAGAATCACTCTTTTGACTCTGCCAGAAAGCTCATCCTCAAGTTTCAGGAACTCAGTCCATGGACAACTTTTGGTCATGTTGCTTCAAATGGGGCAATTCTAGAAGCATTGGAAGGTGAGACCAAGCTTCACATAATTGATATCAGCAACACACTCTGCACTCAGTGGCCTACTCTTTTGGAATCTCTGGCTACAAGGAATGATGACACCCCTCATCTGAAACTCACTGTTGTTGCTCTTAGTGCTTCTATGGTTGGCTCTGTGATTAAGGAAGTTGGTCAGAGGATGGAGAAATTTGCAAGGCTTATGGGAGTGCCCTTTGAATTCAATGTGATTAGTGGGTTGGATCATCTTGGGGAGATCACAAAGGAAGTGTTGGGGGTTCAGGATGATGAGGGTGTTGCAGTGAATTGTGTTGGGGCATTGAGGAGAGTTGAGGTTGGAGAAAGGGAATCTGTGATTGAGATTTTGAAATCACTTGGTCCTAAAGTTGTGACAGTAGTTGAAGAGGAAGCTGATTTTGCAAGCACAAGGAGTGATTTTGTTCAGTGCTTTGAAGAGTGTCTTAGATTCTACAGCATATACTTTGAGATGCTGGAGGAGAGTTTTCCACCAACAAGTAATGAGAGGTTGATGTTGGAAAGGGAGTGTTCAAGGAGCATAGTTAGGGTTTTGGCTTGTGGTGGTGAGGATGAATTTGATCATCATCAAGATGGTAGTAGTGTTATTGTTGGTGGTTGTGAGAGGAGGGAGAGAGGGATACAGTGGTGTGAGAGGCTTAGCAAGTGCTTTTCAGCACTAGTGTTCAGTGATGATGTTGTTGATGATGTTAAAGCATTGCTCAAGAGGTACAGGGCTGGTTGGTCACTTGTGGTGCCTCATTTGTTGCAGCAACCAGATCATCATAACCATAATAATAATCTCTTCTCTGCTGGGATTTACTTGGCATGGAAGGATGACCCTGTTGTTTGGGCTTCAGCATGGAAACCCTAG 1359 0.4422 MENHISPYTSRKPTQQHFNNNHHNDHSHNNTSTTSRSSDYSAGDQQQYDDGKWSCKLLRECARAITERDSTKIQHLLWMLNELASPYGDLDQKLASYFLQALFCKATESGHRCYNTLTSVAEKNHSFDSARKLILKFQELSPWTTFGHVASNGAILEALEGETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVALSASMVGSVIKEVGQRMEKFARLMGVPFEFNVISGLDHLGEITKEVLGVQDDEGVAVNCVGALRRVEVGERESVIEILKSLGPKVVTVVEEEADFASTRSDFVQCFEECLRFYSIYFEMLEESFPPTSNERLMLERECSRSIVRVLACGGEDEFDHHQDGSSVIVGGCERRERGIQWCERLSKCFSALVFSDDVVDDVKALLKRYRAGWSLVVPHLLQQPDHHNHNNNLFSAGIYLAWKDDPVVWASAWKP* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1718 452 Pfam GRAS domain family 56 451 IPR005202 -
Aev10g1718 452 MobiDBLite consensus disorder prediction 1 47 - -
Aev10g1718 452 MobiDBLite consensus disorder prediction 1 17 - -
Aev10g1718 452 MobiDBLite consensus disorder prediction 25 47 - -
Aev10g1718 452 PANTHER PROTEIN SHORT-ROOT-LIKE 19 451 - -
Aev10g1718 452 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 19 451 IPR005202 -
Aev10g1718 452 ProSiteProfiles GRAS family profile. 45 451 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1718 Aev-Chr10 19350700 19352058 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1718 22 452 GRAS Transcription Factor Family AT4G37650 50.223 2.70e-145 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aev10g1718 GRAS 3.4e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1718 - - ahf:112773020 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0629 09 5593573 5595303 Aev10g1718 10 19350700 19352058 PCT