Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1712 ATGGAATACCCTTTCTCCCCTAAGGGAGGAGGAGCTGGTTACTGGGCATCTCCTAGGGCTCAGTTGGATGGATCAACATCAGTTGATGGTGGAATGAGCAATTCAGTCTCAGATTATATGCCTAATAGCTTCTCTGAGTCCATGGCGTTCGATCCTTATTATAGCGGTTTGTGCAATAGTCCATCCATGACTGATCAGGTTTTGGCCAGTATGCTTCCATATCCATCCCCCAGTGGATTCAATCTAGAGGAACAGAACTGTGGGCAATTCTTCGCGACAGAAATCGATGGAAGTTACATTACTAAGGCAAGTTCTTCCCCTAATTATGGGGAGAAAATAGTGTTTCAACAAATGGACCCTTTACTTTGCTTCTTCGACGATGCAGTTAATGCAAATAACTCAGATTCTAAGCAGAAAATCAATGGTTCTTCTCAACAGATTGATACCTTTGATACTGGAAATTACATAATCTCTAGGCCGCCGAGTTTATCGCTTGATGAGAGAATGTTGAGGGCATTATCCTTCTTAAAGGAATCAGCTGGTGGGGGAATATTGGCACAGGTTTGGGTTCCGATTAAGCACGGTGACCAATTCATCTTGAGCACAACAGAGCAACCTTATTTACTAGACCAAATGCTCGCCGGGTACCGCGAAGTGTCGAGAACGTTTACATTCTCTGCAGAAGGAAAACTAGGATCTTTCCAAGGACTTCCTGGTCGTGTGTTCAACTCCAAAGTTCCTGAGTGGACTTCCAATATCGGTTATTACAATAGGAGTGAGTACTTGAGGATGGATCATGCAATCAAACACGAGATTCGCGGATCAATCGCATTTCCCATTTCTGATATGCAATCTGAACTTCCATGCTGTGCTGTACTGGAACTTGTTACTACAAAGGAAAAGTCTAATTTCGACACAGAATTAGAAATTGTTTGTCATGCACTCCAGAATGTTAATTTAACAACTACTATGCCTCCTCGACTTCTTCCCCAGTGTCTTTCAACCAACAAAAGAGCTGCTTTAACAGAGATTGTCGATGTCTTACGATCCGTGTGTCATGCGCATAGTTTGCCCCTAGCACTGACATGGATTCCATGTTGTTACACTGAAGGCATAGGAGGTGAAGATACAAGGGTACACATAAAAGAGAGTCATTCAAGTCCTAGCGAAAAATGCGTATTGTGTGTAGAAGAATCAGCTTATTATGTAGCAGATAGAGCAATGCAAGGATTTGTTCGTGCATGCATTGAACATTATCTTGAGGAAGGGAAAGGTATAGCTGGGAAAGCTCTTCAATCAAACCATCCTTTCTTCTGTCCTGATGTGAAGGCGAATGATATTGGCGAATATCCGCTTGTTCATCATGCTCGCAAATATAATTTGAATGCTGCAGTTGCAATCAGGCTGAGGAGTGCTTATACAAATGATGATGATTACATTTTGGAATTCTTTCTGCCTGTTAACATGAAAGGGAGTTCAGAGCAGCAACTTTTATTAGACAACCTTTCCGGTACCATGCAGAAAATTTGCAAGAGTTTGAGGACAGTTTCAGATGCTGAATTATCGAAATTAATTGAAGGCTCATATGTGGGATTTGAGAAGAAAAATGTCCCCAGATTTTTTCCTATGTCTAGGAGAAACTCTCAAATACCATTGGTAAATAGTAACAATAATGACTCTATCCATAATAAGATGTCGATCAAGGCGCCTAATCTGCGAAGCAATGGAATCGAGCCTTCTGATAGCCAGGAAACAAATGGATCATCAAGAGGGCAAGTTGAGAAAATGAAACCAGAGAAGAATGTTAGTTTGAGTGTTCTTCAACAGTACTTTTCTGGTACCCTGAAGGATGCTGCTAAGGGCATTGGTGTTTGTCCAACAACTCTGAAAAGGATATGCAGACAACATGGAATTTCGAGATGGCCGTCGCGGAAGATCAAGAAAGTGAACCGGTCGTTAAAGAAAATCCAGACCGTGCTCGACACTGTCCAAGGTGTGGAAGGAGGGTTGAAATTTGATCCCTCTATGGGGGCACTTGTAGCAGCAGGGTCACATAATAAGACTCTTATGTTGCCTCAGAATAGTACTACTATAGAAGAAGACCCTGAACCTATTACTGCAATAGAAAATGATAAAAAAATGGTTCTGAAGAAAAAGGGTTGTTCTAGTATAGACAAATCTAAACATTCAAGTTCCTTGATTGATGAACATAACCCCATTACTTCTTCAGTCTTGACAGACTCATCTAATGGCAAATCAAAGTCAAAAATTGTTCAGGTGAAAGCTACATATGGAGAAGACACGATTCGTTTCAAGTTTGATCCATGTTGGGGTTATTTAAAGCTGTATGAAGATGTAGGAACAAGGTTCAGGTTACAAAAGGGGTCATTTCAGCTAAAGTATCTGGATGATGAAAAGGAGTGGGTGATGCTGTTGGATGATTCAGATTTGGTAGAGTGTGTTGAAATATTGGACCAAATTGGGACACGTAGTGCTAAGTTACTTGTGCGTGATATGGCATGCAATTTAAGCAGCTCTAGCAGTAGTAGTTGCTACCTCTCATGA 2565 0.4125 MEYPFSPKGGGAGYWASPRAQLDGSTSVDGGMSNSVSDYMPNSFSESMAFDPYYSGLCNSPSMTDQVLASMLPYPSPSGFNLEEQNCGQFFATEIDGSYITKASSSPNYGEKIVFQQMDPLLCFFDDAVNANNSDSKQKINGSSQQIDTFDTGNYIISRPPSLSLDERMLRALSFLKESAGGGILAQVWVPIKHGDQFILSTTEQPYLLDQMLAGYREVSRTFTFSAEGKLGSFQGLPGRVFNSKVPEWTSNIGYYNRSEYLRMDHAIKHEIRGSIAFPISDMQSELPCCAVLELVTTKEKSNFDTELEIVCHALQNVNLTTTMPPRLLPQCLSTNKRAALTEIVDVLRSVCHAHSLPLALTWIPCCYTEGIGGEDTRVHIKESHSSPSEKCVLCVEESAYYVADRAMQGFVRACIEHYLEEGKGIAGKALQSNHPFFCPDVKANDIGEYPLVHHARKYNLNAAVAIRLRSAYTNDDDYILEFFLPVNMKGSSEQQLLLDNLSGTMQKICKSLRTVSDAELSKLIEGSYVGFEKKNVPRFFPMSRRNSQIPLVNSNNNDSIHNKMSIKAPNLRSNGIEPSDSQETNGSSRGQVEKMKPEKNVSLSVLQQYFSGTLKDAAKGIGVCPTTLKRICRQHGISRWPSRKIKKVNRSLKKIQTVLDTVQGVEGGLKFDPSMGALVAAGSHNKTLMLPQNSTTIEEDPEPITAIENDKKMVLKKKGCSSIDKSKHSSSLIDEHNPITSSVLTDSSNGKSKSKIVQVKATYGEDTIRFKFDPCWGYLKLYEDVGTRFRLQKGSFQLKYLDDEKEWVMLLDDSDLVECVEILDQIGTRSAKLLVRDMACNLSSSSSSSCYLS* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1712 854 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 5 707 - -
Aev10g1712 854 SMART PB1_new 757 839 IPR000270 GO:0005515
Aev10g1712 854 MobiDBLite consensus disorder prediction 568 592 - -
Aev10g1712 854 ProSiteProfiles RWP-RK domain profile. 583 669 IPR003035 -
Aev10g1712 854 Gene3D - 754 840 - -
Aev10g1712 854 MobiDBLite consensus disorder prediction 568 599 - -
Aev10g1712 854 Pfam PB1 domain 758 838 IPR000270 GO:0005515
Aev10g1712 854 PANTHER PROTEIN NLP8 5 707 IPR045012 GO:0003700
Aev10g1712 854 PANTHER PROTEIN NLP8 752 851 IPR045012 GO:0003700
Aev10g1712 854 SUPERFAMILY CAD & PB1 domains 748 840 - -
Aev10g1712 854 Pfam RWP-RK domain 601 649 IPR003035 -
Aev10g1712 854 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 752 851 - -
Aev10g1712 854 ProSiteProfiles PB1 domain profile. 757 839 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1712 Aev-Chr10 19310647 19313842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1712 747 853 NLP Transcription Factor Family AT2G43500 57.944 1.19e-30 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Aev10g1712 PB1 1.9e-15 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1712 - - aip:107613413 1132.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1712 10 19310647 19313842 Aev10g1712 10 19310647 19313842 ECH
Aev10g1712 10 19310647 19313842 Aev04g3273 04 31894532 31898436 PCT