Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1688 ATGGAGCCTCGCGTTGCCAACAAGTTCCGCCTTGGCCGCAAGATCGGTAGCGGTTCCTTCGGGGAGATCTATCTCGGTACTAATGTTCAGACGAATGAAGAGGTTGCAATCAAGCTCGAAAATACCAAAACCAAGCATCCTCAATTGTTGTATGAATCAAAGCTGTATAGAATACTGCAAGGAGGAACTGGGATCCCAAATATAAGATGGTTTGGCGTTGAGGGAGAATACAATGTCCTTGTGATGGACTTACTTGGCTCTAGTCTTGAAGATTTATTCAATTTCTGTAGTCGGAAATTGTCCCTCAAAACAGTTCTCATGCTTGCTGATCAGATGATAAATCGGGTTGAATTTATTCATACCAAATCATTTTTACATAGGGACATCAAGCCAGACAACTTCCTCATGGGGTTGGGGAGGCGTGCAAATCAAGTTTATGCCATTGATTTTGGTCTTGCTAAGAAATATAGAGACAGCTCTACCCATCGACATATTCCTTACAGAGAGAATAAGAGTTTGACTGGAACTGTAAGATATGCTAGTATGAATACTCATCTTGGAATTGAGCAAAGCCGTAGGGACGACTTAGAGTCACTTGGTTATGTTCTTATGTATTTTTTGAGAGGAAGTCTTCCATGGCAGGGATTGAAAGCAGGTACTAAGAAGCAAAAGTATGAGCAAATCGGTGAGAAGAAGGTTTCTACTTCTATTGAGTCTCTCTGTCGCGGCTATCCCTCTGAATTTTCTTCATATTTCCATTACTGTCGGTCACTGCGGTTTGATGATAAACCTGATTATGCTTATTTGAAAAGGCTTTTCCGAGACCTTTTCATTCGTGAAGGATTCCAGTTTGATTATGTCTTTGATTGGACCATTTTGAAATATCAGCAATCTCAAATAGCCACTCCTCCCACACGTGCTGTGGGTCATGCTCTTGGACCAAGTTCTGGTGTGCCGCCAGCTGTTCTGAATACTGATAGACAGACAGGTGAGGAAGGTGGTAGGCATACTGGTTGGTCTTCATCAGATCCTACTCGTAGAAGAAACTCTGGACCTATTGCAGCGGATGGAAACTTGTCTAGACAAAAGGCCCCTATTACAAGTGACTCAGCTGGATCTAAGGATGTCACGCTGTCTAGTTCTTTCTTCCGGTCAAGTGGATCTACAAGAAGAGCTGCTGTCTCCAGCAGTCGTGATGCAGTCGCTGCTGGCAGTGATGCTGAGCCCTCTCGTCCTCTTGCCGTGGAGGCAAGTCCAGGAGCACTTCGTAAAATATCTGGTGCTCATAGAAGTTCGCCTATCATGTCATCAGAGCACAACCGAGCATCCTCCGGGAGAAACACATCAAACATAAAGAATTTCGAGTCGGCTCTCAGAGGGATCGAGAGCCTGAATTTCAATGAGGAGAGGGTACAGTATTAG 1422 0.4423 MEPRVANKFRLGRKIGSGSFGEIYLGTNVQTNEEVAIKLENTKTKHPQLLYESKLYRILQGGTGIPNIRWFGVEGEYNVLVMDLLGSSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHTKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDSSTHRHIPYRENKSLTGTVRYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEQIGEKKVSTSIESLCRGYPSEFSSYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQIATPPTRAVGHALGPSSGVPPAVLNTDRQTGEEGGRHTGWSSSDPTRRRNSGPIAADGNLSRQKAPITSDSAGSKDVTLSSSFFRSSGSTRRAAVSSSRDAVAAGSDAEPSRPLAVEASPGALRKISGAHRSSPIMSSEHNRASSGRNTSNIKNFESALRGIESLNFNEERVQY* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1688 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Aev10g1688 473 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev10g1688 473 MobiDBLite consensus disorder prediction 305 412 - -
Aev10g1688 473 MobiDBLite consensus disorder prediction 334 348 - -
Aev10g1688 473 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Aev10g1688 473 MobiDBLite consensus disorder prediction 430 449 - -
Aev10g1688 473 PANTHER CASEIN KINASE-RELATED 1 457 - -
Aev10g1688 473 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev10g1688 473 MobiDBLite consensus disorder prediction 428 449 - -
Aev10g1688 473 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 457 IPR030509 GO:0004672|GO:0005524
Aev10g1688 473 Gene3D Transferase(Phosphotransferase) domain 1 1 310 - -
Aev10g1688 473 SUPERFAMILY Protein kinase-like (PK-like) 6 290 IPR011009 -
Aev10g1688 473 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev10g1688 473 CDD STKc_CK1_delta_epsilon 8 282 - -
Aev10g1688 473 MobiDBLite consensus disorder prediction 361 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1688 Aev-Chr10 19193540 19197290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1688 8 213 MAP Kinase Kinase Kinase AT3G06030 28.054 4.27e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Aev10g1688 Pkinase 1.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1688 K02218 - gmx:100778165 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1688 10 19193540 19197290 Aev09g0488 09 4339397 4343053 PCT