Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1680 ATGGGGCATCACTCTTGCTGCAACAAGCAGAAGGTGAAAAGAGGTCTATGGTCACCTGAAGAAGATGAAAAGCTCATCAACTACATCACTACTTATGGTCATGGTTGCTGGAGCTCTGTCCCTAAACTTGCAGGCCTGCAAAGGTGTGGGAAGAGTTGCAGATTGAGATGGATAAATTATCTAAGGCCTGATTTGAAGCGTGGAAGCTTCTCTCCACAAGAAGCAGCTCTCATTATTGAACTCCATAGTATTCTAGGCAACAGGTGGGCTCAGATAGCAAAGCACCTACCTGGAAGAACAGATAATGAAGTGAAAAACTTTTGGAATTCAAGCATAAAGAAGAAGCTCCTTTCTCATCATCATCATGATGTAGTTGTCCCTTCTTCTTTAGCCACCACATTTTCTGATCATCATATTATCAATTCTACTTCTTCCCTGGAAACAATCACTAATTTCTTCCCTTTTACTGAAACCCCTATCCCTATCCCTATCCCTATCCTAAACCCTCACCACCTTGACCAGTTCTACCTTCCAATCCCATCCCCAATCCTACAACCTCATTTTGAAAACCATCATCATAATGATATCAAGCTTGTTGACATTAACAACTACAACAATGCCACCACCAATAATTTCCTCCATAATATTCAGAATCATCATCATCATCCAATAATGCCATCATCACAAACAGAAACAGAACCAGTACTACCATTACCATTACCATCATCTTTATATGAAGATATTATGTTATCATCATTAGCCTGTGTTCCTCTTCACCAAGAAATTATTAATAACCAACTCACCACTACCAAAATTGATGATGATGATGCTTCCACCACAAATTACAACAACAATATTGTTATTGAGAAGCTCATGAATAATCCAAGTAGTACATGGCAGCAGCATTATGACTATGAACAACAACCTAATAATAGCACTACTATTATTGAGGATTATGTTTGTAGCATTATCCCACCATATTCTTCTTCTTCTTCACCTCCTTCTTCCAATTCACAACAAGAGCCTCTTGCTCCTACAATTACTATTTCTTCTCCACAACATGATGATCAAACTACTCTGCTTGTGGCTGCCAATAATAATCAATTGGAATACATCGAATCCAGCAGCGCCCTAATGCCATCCTTACCCTCCTCAACCACTTCTTCCTCATCGGTATCATTCTACCAAGCAGAAAAATAG 1200 0.3925 MGHHSCCNKQKVKRGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSPQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSHHHHDVVVPSSLATTFSDHHIINSTSSLETITNFFPFTETPIPIPIPILNPHHLDQFYLPIPSPILQPHFENHHHNDIKLVDINNYNNATTNNFLHNIQNHHHHPIMPSSQTETEPVLPLPLPSSLYEDIMLSSLACVPLHQEIINNQLTTTKIDDDDASTTNYNNNIVIEKLMNNPSSTWQQHYDYEQQPNNSTTIIEDYVCSIIPPYSSSSSPPSSNSQQEPLAPTITISSPQHDDQTTLLVAANNNQLEYIESSSALMPSLPSSTTSSSSVSFYQAEK* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1680 399 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev10g1680 399 CDD SANT 17 61 IPR001005 -
Aev10g1680 399 Gene3D - 11 67 - -
Aev10g1680 399 PANTHER MYB DOMAIN PROTEIN 55 1 361 - -
Aev10g1680 399 SMART sant 66 114 IPR001005 -
Aev10g1680 399 SMART sant 13 63 IPR001005 -
Aev10g1680 399 Gene3D - 69 116 - -
Aev10g1680 399 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Aev10g1680 399 PANTHER TRANSCRIPTION FACTOR MYB26 1 361 - -
Aev10g1680 399 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aev10g1680 399 MobiDBLite consensus disorder prediction 327 352 - -
Aev10g1680 399 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Aev10g1680 399 CDD SANT 69 109 IPR001005 -
Aev10g1680 399 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Aev10g1680 399 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev10g1680 399 MobiDBLite consensus disorder prediction 377 399 - -
Aev10g1680 399 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1680 Aev-Chr10 19128159 19129638 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1680 1 207 MYB Transcription Factor Family AT3G13890 64.953 3.79e-83 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev10g1680 Myb_DNA-binding 1.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1680 K09422 - gmx:102662609 339.347