Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1670 ATGATGAAGGGTTTGATGTTCCAACAGCAACAGCAACAGCAACCATTAGTAGTAGCAGAAGAGAACATGTCCAATTTGACTTCCGCATCTGGTGAAGCAAGTGCTTCCTCTGGAACCAGAACCGATTACCCTCATCAACAATACTTAGCCCCACCACCATCTCAAGATCAAACTCAACCCCCACCCAAGAAAAAGAGAAACCTTCCTGGTAACCCAGACCCAGATGCTGAAGTGATAGCGTTGTCACCAAAGACTCTGCTGGCGACAAATAGGTTCATATGTGAGATCTGTAACAAAGGGTTCCAAAGGGATCAGAACCTTCAGCTGCACAGAAGAGGGCACAACTTACCATGGAAGCTGAAGCAGAGAACGAGCAAAGAGATAAGGAAGAAGGTGTACGTGTGCCCAGAAGCGACATGTGTGCACCATGACCCATCAAGGGCCCTCGGGGACCTAACAGGGATAAAGAAGCACTTCTGCAGGAAGCACGGTGAGAAGAAGTGGAAATGTGACAAGTGCTCCAAGAAGTATGCTGTTCAATCGGATTGGAAGGCTCACTACAAGACCTGTGGCACTCGGGAGTACCGATGTGACTGTGGCACCCTCTTCTCAAGGAGGGACAGTTTTATTACCCACAGAGCCTTCTGTGATGCACTCGCCGAGGAGAGCGCTAGAGCAGTTACTGCACCCCCACCACCACCACCACCACCACCAGGAGGAGGAGGAGGAGGAGCCTCTCATCATCAAGAACACCTCCATGGTTTCCCATTGAAGCAGGAAATAATGGCAACATGGCTTAGCCCCCAGCACGGTGGCGGTATTGATCTCTCATCACCATCACTCCATGATCAGAGCACAAACACAAACACAAACCCTAACCCTAGCCAAGTTGGGCCCACACTACCAGCGTACCAGCCAGTGGGTTCAGCGCACATGTCAGCCACAGCATTGCTGCAGAAAGCAGCTCAGATGGGTGCAACCATCACGAAAGCAACAACTGCACATCCTCAGCCACACCCCATGACGATGCTGATGAGGACCCACCACCACCACCACCAACCTCACGTGTCCTCTTCTTCTGCTGCTGATAACTCCTCATCGCCCAGTGGTGGTTTTGCTCTGAATTTATCGTCACGTGATGAAGACAACAACACTACTGCTACTCCAATAACCACAGGCTTTGGCCATGACTTGATCACACCACCAACAGTAGTGCCACATTCTTCTTCTTCGCTCCTTCATCATGTTATCAACTCGTTCTCTTCTTCTGCTTCCGCCTTTGATGGAACTTCTTTTGAGGACGCTTTTGGCGCCATCCTCAACAAGGATGACGCCAAAACTGCCACCGATGACGGTGGCGCCGGAGGAGGAGGTGGTGGTAATAATAATAATAATAATAATAACAATAACAATGAGGGACTGACGAGGGATTTCTTGGGTCTAAGACCACTCTCACATAGTGATATCCTCACGATTGCGGGTATGGGGAACTGTATGAACTCGTCGTCATCCTCTTCACATGATCACCATCATCAACACCTTACCCAAAAGCCGTGGCAAGGTTAG 1566 0.4987 MMKGLMFQQQQQQQPLVVAEENMSNLTSASGEASASSGTRTDYPHQQYLAPPPSQDQTQPPPKKKRNLPGNPDPDAEVIALSPKTLLATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEIRKKVYVCPEATCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHYKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESARAVTAPPPPPPPPPGGGGGGASHHQEHLHGFPLKQEIMATWLSPQHGGGIDLSSPSLHDQSTNTNTNPNPSQVGPTLPAYQPVGSAHMSATALLQKAAQMGATITKATTAHPQPHPMTMLMRTHHHHHQPHVSSSSAADNSSSPSGGFALNLSSRDEDNNTTATPITTGFGHDLITPPTVVPHSSSSLLHHVINSFSSSASAFDGTSFEDAFGAILNKDDAKTATDDGGAGGGGGGNNNNNNNNNNNEGLTRDFLGLRPLSHSDILTIAGMGNCMNSSSSSSHDHHHQHLTQKPWQG* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1670 521 PANTHER PROTEIN INDETERMINATE-DOMAIN 7 25 497 - -
Aev10g1670 521 SUPERFAMILY beta-beta-alpha zinc fingers 91 188 IPR036236 -
Aev10g1670 521 ProSitePatterns Zinc finger C2H2 type domain signature. 94 114 IPR013087 -
Aev10g1670 521 ProSiteProfiles Zinc finger C2H2 type domain profile. 92 114 IPR013087 -
Aev10g1670 521 Pfam Zinc-finger double-stranded RNA-binding 92 114 IPR022755 -
Aev10g1670 521 SMART c2h2final6 133 163 IPR013087 -
Aev10g1670 521 SMART c2h2final6 92 114 IPR013087 -
Aev10g1670 521 SMART c2h2final6 168 188 IPR013087 -
Aev10g1670 521 MobiDBLite consensus disorder prediction 227 241 - -
Aev10g1670 521 MobiDBLite consensus disorder prediction 1 77 - -
Aev10g1670 521 MobiDBLite consensus disorder prediction 458 475 - -
Aev10g1670 521 Gene3D Classic Zinc Finger 72 142 - -
Aev10g1670 521 MobiDBLite consensus disorder prediction 1 53 - -
Aev10g1670 521 MobiDBLite consensus disorder prediction 500 521 - -
Aev10g1670 521 MobiDBLite consensus disorder prediction 357 393 - -
Aev10g1670 521 MobiDBLite consensus disorder prediction 224 250 - -
Aev10g1670 521 MobiDBLite consensus disorder prediction 268 301 - -
Aev10g1670 521 MobiDBLite consensus disorder prediction 450 475 - -
Aev10g1670 521 MobiDBLite consensus disorder prediction 347 397 - -
Aev10g1670 521 MobiDBLite consensus disorder prediction 271 301 - -
Aev10g1670 521 Gene3D Classic Zinc Finger 146 226 - -
Aev10g1670 521 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 25 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1670 Aev-Chr10 19068811 19071009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1670 20 333 IDZ Gene Family AT1G55110 59.312 3.78e-118 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev10g1670 zf-C2H2_jaz 7.7e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1670 K25870 - gmx:100785687 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1670 10 19068811 19071009 Aev09g0505 09 4487578 4494657 PCT