Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1656 ATGAGCCGCTATGACAGCCGCTCCGCCGACCCCGCTTCCTACCGTGACCGTAGAAGTGATTCGGGGCTAGGTGGTGCGCCTCCAGCTACAGCTACTACAGGCTACGGTGGTTCTAGCAGAAAGGATTACGATGATGGCGGCGCGTCCCCGAGGAAGCTCAATTTGGACGGCTTGCCACATTTCGAGAAGAATTTCTACCATGAATCCCCGGAGGTTAGGGCAATGACGGAGGCCGAGGTTGACGAGTACCGACGCCGGAGGGAAATCACCGTTGAAGGCCGCGACGTTCCTAAACCTGTCAAGTCCTTTCATGATGTCGGTTTTCCAGAATATGTACTGCAAGAGATTAAGAAAGCTGGATTTGTTGAACCTACGCCAATTCAGTCTCAAGGTTGGCCAATGGCCTTGAGAGGGCGTGATCTTATCGGAATTGCGGAAACAGGGTCAGGGAAGACACTTGCTTACTTGTTGCCTTCCATAGTCCATGTTAACGCCCAGCCGATTTTAGATCCTGGAGATGGACCAATTGTGTTGGTTTTGGCTCCAACACGTGAACTTGCCGTCCAAATACAGCAGGAGGCTACTAAATTTGGTGCGTCATCAAGGATTAAGAGTACATGCATCTATGGTGGGGTTCCAAAGGGGCCCCAGGTGCGTGATCTCCAGAAAGGCGTTGAGATTGTAATTGCCACTCCGGGAAGGTTAATTGATATGATTGAGTCCAATCATACTAACTTGCGGAGGGTCACATACCTTGTGTTGGATGAAGCTGATAGGATGTTGGACATGGGGTTTGATCCTCAGATACGAAAGATTGTCTCTCAGATTCGTCCAGACCGTCAGACTTTGTACTGGAGTGCTACTTGGCCAAAGGAGGTTGAACAATTGGCAAGGCAGTTCCTTTATAACCCATACAAAGTAATTATAGGTTCTCCTGATTTAAAAGCTAACCATGCTATACGGCAATACGTTGACATTGTATCTGAAAAGCAGAAATACGATAAATTAGTGAAGTTGCTAGAGGACATCATGGATGGCAGCCGCATACTTATTTTCATGGATACCAAGAAAGGATGTGATCAGATCACTAGGCAACTCCGCATGGATGGTTGGCCTGCACTTTCAATTCATGGAGATAAAAGTCAAGCAGAAAGAGATTGGGTGCTCTCAGAGTTTAAATCTGGAAAGAGTCCTATAATGACTGCAACAGACGTTGCAGCTCGTGGGTTAGATGTGAAGGATGTGAAGTACGTGATAAATTATGACTTCCCGGGATCACTTGAAGATTATGTACATCGCATTGGTAGGACTGGGAGAGCTGGTGCAAAAGGAACTGCATACACATTCTTCACAGCTGCTAATGCCAGATTTGCAAAGGAACTTATAACCATACTTGAGGAAGCTGGACAGAGGGTGAGTCCTGAATTGGCAGCAATGGGGCGTGGTGCACCTCCTCCACCATCAGGTTTCCGAGATCGTGGGAAGGGTTATGGCAGTGGTCGCCCATGGAGTTGA 1515 0.4792 MSRYDSRSADPASYRDRRSDSGLGGAPPATATTGYGGSSRKDYDDGGASPRKLNLDGLPHFEKNFYHESPEVRAMTEAEVDEYRRRREITVEGRDVPKPVKSFHDVGFPEYVLQEIKKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPSIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIESNHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQYVDIVSEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELITILEEAGQRVSPELAAMGRGAPPPPSGFRDRGKGYGSGRPWS* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1656 504 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 335 480 IPR001650 -
Aev10g1656 504 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 101 129 IPR014014 GO:0003724
Aev10g1656 504 Pfam DEAD/DEAH box helicase 125 296 IPR011545 GO:0003676|GO:0005524
Aev10g1656 504 SMART ultradead3 120 323 IPR014001 -
Aev10g1656 504 SMART helicmild6 360 441 IPR001650 -
Aev10g1656 504 CDD DEADc_DDX5_DDX17 112 307 - -
Aev10g1656 504 Pfam Helicase conserved C-terminal domain 332 441 IPR001650 -
Aev10g1656 504 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 55 491 - -
Aev10g1656 504 Gene3D - 311 481 IPR027417 -
Aev10g1656 504 PANTHER LD32873P 55 491 - -
Aev10g1656 504 MobiDBLite consensus disorder prediction 477 504 - -
Aev10g1656 504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 457 IPR027417 -
Aev10g1656 504 MobiDBLite consensus disorder prediction 1 54 - -
Aev10g1656 504 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 253 261 IPR000629 -
Aev10g1656 504 Gene3D - 63 310 IPR027417 -
Aev10g1656 504 MobiDBLite consensus disorder prediction 1 17 - -
Aev10g1656 504 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 132 307 IPR014001 -
Aev10g1656 504 CDD SF2_C_DEAD 320 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1656 Aev-Chr10 18970841 18974011 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1656 88 461 Eukaryotic Initiation Factors Gene Family AT3G19760 35.200 8.65e-79 250