Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1650 ATGGACTCCGAAGCTGACCCTCCTCAGAACCCACCCAAAAGACTCAAATGCTCAGCATGCTATAAGCAATATAAGAAAAAGGAGCATCTTATTGAGCACATGAAAATCTCATACCATTCTGCTCATCAGCCTAGATGTGGGGTCTGCCAAAAGCACTGCAAATCTTTTGAGTCATTGAGGGAACATCTTACCGGTCCTTTGCCAAAAGGACTTTGTTCAACAATTTTCTCTAATCAAGGTTGTCAACTATGCTTGAAAGTCTTTGATAGTGCTGTGTCTCTCAGTCAGCATAGAGAAACATGTTGCCTCCCAGCCCCTGCTCCTTTGGGAACAACTGCTTTGCCCTACATAGGTTCCGATATTGACCGTGAATATTCTGCTGATGAAAACCATGCCGGTGGACGCCCTGGAGCAATTGCAATGGACTGTGAAATGGTTGGTGGTGGTAGTGATGGTTCACTGGAACTTTGTGCTAGGATATGCTTGGTTGATGAAGATGAGAACTTAATCTTCCACACCTATGTACAGCCACTAATCCCTGTTACTAACTATAGATATGATATAACTGGGTTGACAGAAGAGCATCTTAGAAATGCCATGCCACTGAAGGAAGTTCAGGAAAAGGTATTGCAAATTCTATACAATGGAGAATCCATTGGCAAAGTTAGATTGGATGGTGGAAAGGCTAGGCTTCTTGTGGGGCATGACTTAGCCCATGATTTAGATTGCTTGAAATTAAATTATCCCGATCACATGATGAGGGACACTGCAAAGTACCGTCCATTGATGAAAACAAACTTGGTCAGCCATTCGCTCAAGTATCTCACCAAAACATATTTAGGTTATGATATCCAATGCGGCACTCATGACCCATATGAAGATTGCATTTCTGTCATGAGACTGTACAAGAGGATACGAGGACAAATTCATCTGGAGGAAGGTTCTGGAACATTGACTTCAATCAACAACATTATGGGCAAGTCTGATTGTTGGAAATCAAAGGAACTTGACAACCTCTCACCAGATGAACTCTATGCCATGTCAAGATCAGACTACAGGTGTTGGTGTTTGGATTTGAGACAAAACTTGGCACCCTGA 1098 0.4262 MDSEADPPQNPPKRLKCSACYKQYKKKEHLIEHMKISYHSAHQPRCGVCQKHCKSFESLREHLTGPLPKGLCSTIFSNQGCQLCLKVFDSAVSLSQHRETCCLPAPAPLGTTALPYIGSDIDREYSADENHAGGRPGAIAMDCEMVGGGSDGSLELCARICLVDEDENLIFHTYVQPLIPVTNYRYDITGLTEEHLRNAMPLKEVQEKVLQILYNGESIGKVRLDGGKARLLVGHDLAHDLDCLKLNYPDHMMRDTAKYRPLMKTNLVSHSLKYLTKTYLGYDIQCGTHDPYEDCISVMRLYKRIRGQIHLEEGSGTLTSINNIMGKSDCWKSKELDNLSPDELYAMSRSDYRCWCLDLRQNLAP* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1650 365 Gene3D - 135 314 IPR036397 GO:0003676
Aev10g1650 365 SUPERFAMILY Ribonuclease H-like 139 306 IPR012337 -
Aev10g1650 365 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 12 362 - -
Aev10g1650 365 CDD REX4_like 139 303 IPR037431 GO:0006364|GO:0008408
Aev10g1650 365 Gene3D Classic Zinc Finger 2 65 - -
Aev10g1650 365 Pfam Exonuclease 139 302 IPR013520 -
Aev10g1650 365 ProSiteProfiles Zinc finger C2H2 type domain profile. 15 44 IPR013087 -
Aev10g1650 365 SMART exoiiiendus 137 311 IPR013520 -
Aev10g1650 365 ProSitePatterns Zinc finger C2H2 type domain signature. 17 39 IPR013087 -
Aev10g1650 365 PANTHER EXONUCLEASE FAMILY PROTEIN 12 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1650 Aev-Chr10 18945742 18948263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1650 1 362 C2H2 Transcription Factor Family AT2G48100 54.098 1.19e-139 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1650 K18327 - gmx:100805841 622.083