Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1640 ATGGCCTCAGTTCCTGGTCAGCTTATTTGGGAGATCGTGAAGAACAACAACTCCTTTTTGGTAAAGGAGTTCGGTAGGGGCACTCAGAGCGTCCAGTTCAGCAGAGAGAGCAACAATCTCTACAACCTCAACTCTTTCAAGTACTCTGGTTTGGCAAACAAGAAATCTGTTACTATTCAGCCTTCTGGCAAGGATCAATCTGTGTTGTTGGCAACAACTAAGACAAAGAAACAAAACAAGCCATCTGCATTGCTTCACAAATCTGTCATGAAGAAGGAGTTCAGTAGAATGGCAAAGGCTGTGCAAAATCAGGTTGCAGATAACCACTACAGGCCTGATCTCAAGAAAGCAGCTCTAGCAAGGTTGAGCGCTGTTAACAGAAGCCTCAGGGTTGCCAAGTCTGGTGTCAAGAAGAGAAACAGACAGGCCGTGAGGGTCCCTGGTAGAAAGTGA 453 0.4592 MASVPGQLIWEIVKNNNSFLVKEFGRGTQSVQFSRESNNLYNLNSFKYSGLANKKSVTIQPSGKDQSVLLATTKTKKQNKPSALLHKSVMKKEFSRMAKAVQNQVADNHYRPDLKKAALARLSAVNRSLRVAKSGVKKRNRQAVRVPGRK* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1640 150 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
Aev10g1640 150 Gene3D - 6 133 - -
Aev10g1640 150 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Aev10g1640 150 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1640 Aev-Chr10 18892232 18893964 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1640 1 143 Cytoplasmic Ribosomal Protein Gene Family AT2G19730 74.126 8.38e-77 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1640 K02903 - gmx:100500189 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1640 10 18892232 18893964 Aev10g1640 10 18892232 18893964 ECH