Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1624 ATGGGCAAAGCTACCAGATGGTTGAAGGGGTTGTTGGGAATGAAGGAGAAGAAGGACCATTGTGACAATTTGGGCTCATTGGCTCCTCACAAGAAGGAGAAGAAACGTACGAGTTTCACCAAGTCAGGGAAGGATCATGAAGTGACTCAAATTGCTCCAAATGGTGATGTTAGGCTCAGATCCTATGTTGCTGAGCAAGAGAGTGAGCAGAACAAGCATGCCATTGCCGTGGCGGCTGCCACTGCAGCTGCCGCCGATGCTGCAGTGGCCGCCGCACACGCTGCAATGGCAGTTGTGAGGCTAACAAGCCATGGCAGAGGTACATTGTTTAGTGGAAGCAGGGAGAGGTGGGCTGCAATGAAGATCCAATCATTCTTCAGAGGTTATTTGGCTCGGAAGGCTCTGAGAGCACTTAAAGGACTGGTTAAGATACAAGCTCTTGTTAGAGGCTACCTAGTTAGGAAAAGGGCTGCTGCAACTCTTCATAGTATGCAGGCTCTACTGAGAGCTCAGGTTGCCGTCCGTTCGCAGAGAGCTCGCCGTTCGACGAGCAGGGGGAGCAGTAGATTTCAACCTCAAACTCCTGCAAGAAAATACATGCAATGGTTTGATGAGACAAGAAGTGACTTCCACAGTAAAAGGCTTGCAACATCTTATGAAACATCATCATTCAATATCAATGGATTTGATGAGAGCCCCAAAATTGTTGAGATTGACACTTACAGGCCCCAATCAAGGTCTAGAAGAATCACTACTACTACAGTGTCTGAAAGTGGAGAAGATCATCTGCATTACCAAGCAATCTCAGTTCTTGAGTGTAGAAATCCTCAGCATTTGGAATGGTACTTGAATGCAGATGAATGTAAGTTCTCCACGGCTCACAGCACGCCTCGATTGGCTAATGCCCCGGCGACGCCGTTGAAGAGTGTTTGTGGAGACCCTCCCTTAAGGCCTTACTGCAATTCTCCTAACTACATGGCTAATACTCAATCATATAAGGCTAAACTAAGGTCTCATAGTGCTCCAAAGCAGAGGCCTGAGCCAAAGAAGAGGATTTCCCTCAATGAAATAATGGCAGGAAGAAATAGCACTAGTGGTATTAGAAGGGCATGGTCATCCAAACCAGAATCTCAAGAATATTGCAGTTTTGACAAAGTTGGTTATTCAGGCCAGTTGGAGAATCAGAAGGAAAATTTTAGAAGAAATTGA 1209 0.4624 MGKATRWLKGLLGMKEKKDHCDNLGSLAPHKKEKKRTSFTKSGKDHEVTQIAPNGDVRLRSYVAEQESEQNKHAIAVAAATAAAADAAVAAAHAAMAVVRLTSHGRGTLFSGSRERWAAMKIQSFFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALLRAQVAVRSQRARRSTSRGSSRFQPQTPARKYMQWFDETRSDFHSKRLATSYETSSFNINGFDESPKIVEIDTYRPQSRSRRITTTTVSESGEDHLHYQAISVLECRNPQHLEWYLNADECKFSTAHSTPRLANAPATPLKSVCGDPPLRPYCNSPNYMANTQSYKAKLRSHSAPKQRPEPKKRISLNEIMAGRNSTSGIRRAWSSKPESQEYCSFDKVGYSGQLENQKENFRRN* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1624 402 Pfam IQ calmodulin-binding motif 142 156 IPR000048 GO:0005515
Aev10g1624 402 Pfam IQ calmodulin-binding motif 116 136 IPR000048 GO:0005515
Aev10g1624 402 SMART iq_5 114 136 IPR000048 GO:0005515
Aev10g1624 402 SMART iq_5 137 158 IPR000048 GO:0005515
Aev10g1624 402 Pfam Protein of unknown function (DUF4005) 296 365 IPR025064 -
Aev10g1624 402 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 372 - -
Aev10g1624 402 ProSiteProfiles IQ motif profile. 139 166 IPR000048 GO:0005515
Aev10g1624 402 Gene3D - 115 157 - -
Aev10g1624 402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 157 IPR027417 -
Aev10g1624 402 MobiDBLite consensus disorder prediction 24 43 - -
Aev10g1624 402 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Aev10g1624 402 MobiDBLite consensus disorder prediction 24 44 - -
Aev10g1624 402 PANTHER IQ-DOMAIN 5-RELATED 1 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1624 Aev-Chr10 18807139 18808766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1624 1 368 IQD Protein Family AT3G16490 53.230 8.45e-100 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1624 - - gmx:100797686 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1624 10 18807139 18808766 Aev10g1624 10 18807139 18808766 ECH
Aev10g1624 10 18807139 18808766 Aev09g0297 09 2450449 2452603 PCT