Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1622 ATGATGGATGAAAGGTCAAAAAGGAATGAGGTATGTCCTCCTCATCATCACCAGCTACTGGACTTGATCCCAAATGAGAGATCAGAGTGGCATCATGGCATGAGAGGAGATGAGAGGAAGCTGGAGCTGAGTCTTGCTCCACCCGGTGGTGAACAAGACTGGTCTCTCAACCACCACAGAACAAAGAACAACCACCTCAACTCTGATGACAGAGATGACTCTCTCCTCTCTCTTGGTTACTTCCCTCATGCAACCAATAGCACCAAAGGTGGTCCTTCATCATCATCATTTCTTCATCAGTTTCAACCATCATCACCATCAAGCATGCCTCTCATGGGAAAGGATGCGTCACAACCACCCTGCTGCACTAAAGTGATAGATCATCAGTTGCAGAATAATAATAATAATAATAATAATGCAGAGAAGAAAGTTTTCTCCTCTTCTCCCTCCTCTGCTGCTAATACAGCTGTTCCCAACACCTCTCAGAAAAGAACTGCTCCAGGTCCAGTAGTGGGATGGCCTCCAATTCGTTCTTTCAGGAAGAACCTTGCAAGCAGCAGTTCTTCTAAGCCACAAACTCCTCCTCCTGAGTCTGACTCACCCCATCAGCCTCACAACAAGGTGGTTGCTGCTGGAAAGAAGCCTTCTGACACCAACTATGGCAAAGGCATGTTTGTCAAGATCAACATGGATGGAGTTCCAATTGGCAGGAAAGTTGACCTTAATGCTTATCACACCTATGAAAATCTCTCCTCTGCTGTTGATGAACTCTTCAGAGGCCTCCTTGCAGCTCAAAGAGATTCCTCTGGTGGTGGAGTTCACAAGAAGCAATTAGAGGAAGAGAAAGCAATAACAGGATTACTGGATGGAAGTGGAGAGTATACTCTTGTTTATGAAGACAATGAAGGAGACAGGATGCTTGTTGGGGATGTGCCATGGCACATGTTCGTATCAACAGTGAAGAGGCTGCGAGTGTTGAAGAGTACTGAGCTTTCTGCTTTTACCCTTGGTGGTAAGCAAGAAAAAGAAACCACTTGA 1038 0.4557 MMDERSKRNEVCPPHHHQLLDLIPNERSEWHHGMRGDERKLELSLAPPGGEQDWSLNHHRTKNNHLNSDDRDDSLLSLGYFPHATNSTKGGPSSSSFLHQFQPSSPSSMPLMGKDASQPPCCTKVIDHQLQNNNNNNNNAEKKVFSSSPSSAANTAVPNTSQKRTAPGPVVGWPPIRSFRKNLASSSSSKPQTPPPESDSPHQPHNKVVAAGKKPSDTNYGKGMFVKINMDGVPIGRKVDLNAYHTYENLSSAVDELFRGLLAAQRDSSGGGVHKKQLEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTELSAFTLGGKQEKETT* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1622 345 SUPERFAMILY CAD & PB1 domains 214 325 - -
Aev10g1622 345 MobiDBLite consensus disorder prediction 86 112 - -
Aev10g1622 345 MobiDBLite consensus disorder prediction 31 71 - -
Aev10g1622 345 MobiDBLite consensus disorder prediction 124 166 - -
Aev10g1622 345 ProSiteProfiles PB1 domain profile. 223 328 IPR000270 GO:0005515
Aev10g1622 345 PANTHER AUXIN-RESPONSIVE PROTEIN IAA26 17 341 - -
Aev10g1622 345 Pfam AUX/IAA family 41 332 IPR033389 -
Aev10g1622 345 MobiDBLite consensus disorder prediction 55 71 - -
Aev10g1622 345 MobiDBLite consensus disorder prediction 86 216 - -
Aev10g1622 345 Gene3D - 218 339 - -
Aev10g1622 345 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 17 341 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1622 Aev-Chr10 18791268 18794002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1622 227 339 B3 DNA Binding Superfamily AT4G23980 33.628 1.03e-13 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Aev10g1622 AUX_IAA 2.7e-68 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1622 K14484 - gmx:100799244 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g0294 09 2425479 2427831 Aev10g1622 10 18791268 18794002 ECH
Aev10g1622 10 18791268 18794002 Aev10g1622 10 18791268 18794002 ECH
Aev10g1622 10 18791268 18794002 Aev09g0294 09 2425479 2427831 PCT