Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1615 ATGCACTATTGTTCTCTAATCTTCTTCTTCTTCTTCTTCTTCTTTCTGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTATATCCATTCATCACACAATATTCTGCTTCTTCTTCTCCGAGCCTCTCTCGCTGCGATTGCTCTTCGACCGAGTCACGCGGGCGGCGATTCGGCATGACTCGGCGTTGCTCTCACTGCAGCAATAACGGCCACAACTCCCGGACGTGCCCCACTCGCGGCGGCGGCGGCGGGGGAGCGCCGGGAGGAGGAGGAGGAGGAGGAGGAGTGAAGCTGTTCGGAGTGAGGCTGACGGATGGATCGATCATAAAAAAGAGTGCCAGCATGGGGAACCTCACGGCGCTCCACCACCATTGCTCTTCTCCGTCGTCCTCCGCCGTGGCCGCCGCCAATAATCCCGGCTCCCCTTGCTCCGACCAACCGCATGAGCCCGACGGTTATTTGTCTGACGACCCCGCCCATGCCTCCGCCTTCGCCAGCCGCCGTGGTGAAAGAAAGAAAGGTGTTCCATGGACTGAGGAAGAACATCGGATGTTCTTAGTTGGTCTCCAGAAGCTGGGCAAAGGAGACTGGCGTGGAATAGCACGTAATTTTGTCGTGTCAAGGACCCCTACACAAGTAGCAAGTCATGCCCAGAAGTATTTTATCCGGCAGAGTAGTGCTACCAGGAGAAAGAGACGTTCCAGCCTTTTTGACATGGTTCCAGATATGGCTTCAGATCCACCTTCTGTGCCAGAAGAACAAGTATTGCTTCTGCCTTCTGAGAACACAAAACCTAGTAATGGAAAATCGCAGCCTTCATTAAATCTATCTCTCAACTCTGAATTTGAACCCATGGAAACTGCTTCTGAAGAGAATGTGGAGGAGGCCAAAGCCAATGAAGCTAAGATAGGATCTAATGGATTGACACCAGTGGCTGCTCATGGATACTTCCCAGCTTATGTACCTGTCCAATTTTCCATATGGCCATCGATTGCAGCTCCCTTTGAAGAAGTTAATGGAGGAGAGACATCTCAGCACCAGGTCCTCAAGCCGATCCCGGTCATTCCGAAGGAACCTGTCAATGTTGATGAACTTGTGGGAATGTCTCATCTGAGCATTGGGGAAACAAGGGTACATGCTGATAGGGAGCCTTCCCCACTGTCCTTGAAATTGTTAGGAGAGCCCTCAAGGCAGTCAGCATTCCATGCAAATGCTGCAGTTGGTGGTTCAGACCTAAACAGTGGCAAGAACAATGCAATTCAAGCTGTCTGA 1275 0.5129 MHYCSLIFFFFFFFFLFLSLSLSLSLYLYPFITQYSASSSPSLSRCDCSSTESRGRRFGMTRRCSHCSNNGHNSRTCPTRGGGGGGAPGGGGGGGGVKLFGVRLTDGSIIKKSASMGNLTALHHHCSSPSSSAVAAANNPGSPCSDQPHEPDGYLSDDPAHASAFASRRGERKKGVPWTEEEHRMFLVGLQKLGKGDWRGIARNFVVSRTPTQVASHAQKYFIRQSSATRRKRRSSLFDMVPDMASDPPSVPEEQVLLLPSENTKPSNGKSQPSLNLSLNSEFEPMETASEENVEEAKANEAKIGSNGLTPVAAHGYFPAYVPVQFSIWPSIAAPFEEVNGGETSQHQVLKPIPVIPKEPVNVDELVGMSHLSIGETRVHADREPSPLSLKLLGEPSRQSAFHANAAVGGSDLNSGKNNAIQAV* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1615 424 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 170 226 IPR017930 -
Aev10g1615 424 CDD SANT 177 222 IPR001005 -
Aev10g1615 424 SUPERFAMILY Homeodomain-like 172 227 IPR009057 -
Aev10g1615 424 PANTHER TRANSCRIPTION FACTOR KUA1 60 418 - -
Aev10g1615 424 Gene3D - 178 227 - -
Aev10g1615 424 ProSiteProfiles Myb-like domain profile. 170 222 IPR001005 -
Aev10g1615 424 PANTHER OS01G0187900 PROTEIN 60 418 - -
Aev10g1615 424 SMART sant 174 224 IPR001005 -
Aev10g1615 424 ProSiteProfiles SANT domain profile. 178 226 IPR017884 -
Aev10g1615 424 MobiDBLite consensus disorder prediction 129 160 - -
Aev10g1615 424 Pfam Myb-like DNA-binding domain 177 222 IPR001005 -
Aev10g1615 424 MobiDBLite consensus disorder prediction 129 145 - -
Aev10g1615 424 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 173 225 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1615 Aev-Chr10 18742226 18745941 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev10g1615 Myb_DNA-binding 7.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1615 - - gmx:778036 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1615 10 18742226 18745941 Aev10g1615 10 18742226 18745941 ECH