Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1610 ATGTCAATGTCCTGCAAGGATGGTAAACATGGAGGATTGGACAACGGGAAGTATGTGCGATACACACCTGAGCAGGTTGAAGCCCTCGAGAGGCTCTATCATGACTGCCCCAAACCCAGCTCCATCCGCCGCCAGCAGCTCATCCGCGAGTGCCCTATCCTCTCCAACATTGAGCCCAAGCAAATCAAAGTCTGGTTCCAGAACCGAAGATGTAGGGAGAAGCAGAGGAAAGAGGCTTTGCGCTTGCAGGCTGTAAATAGGAAACTGACAGCCATGAACAAGCTGCTGATGGAGGAGAATGATAGGTTGCAGAAGCAAGTGTCTCAATTGGTGTATGAAAATGGCTACTTTCGTCAACATACCCAAAACACTACGCTGCCAACCAAAGACACGAGCTGTGAATCAGCGGTGACTAGTGGTCAACGCAGCTTGACAAACCAGCATCCCCCAAGGGATGCAAGTCCTGCAGGGCTTTTGTCCATTGCAGAAGAGACTTTAGCAGAGTTTCTTTCAAAGGCTACTGGAACTGCTGTTGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTAGCTATTTCTCATGGTTGCACTGGTGTGGCAGCAAGAGCCTGCGGCCTAGTGGGTCTTGAACCCACAAGGGTTGCAGAGATCCTCAAAGATCGGCCTTCTTGGTTCCGTGATTGCCGAGCTGTTGATGTTCTGAATGTGCTGCCCACAGCTAATGGTGGAACCATTGAGCTGCTTTATATGCAGCTATATGCGCCAACTACATTGGCACCTGCTCGGGACTTTTGGTTGTTGCGCTACACTTCTGTTTTAGAAGATGGAAGCCTAGTGGTCTGTGAGAGGTCCCTTAAGAATACACAAAATGGTCCGAGCATGCCTCCCGTGCAGCATTTTGTTAGAGCAGAGATGCTGCCTAGTGGGTACCTGATAAGACCTTGTGAAGGAGGTGGTTCCATCATCCACATTGTTGATCACATGGATTTGGAGCCTTGGAGTGTTCCTGAAGTATTGCGCCCACTGTACGAATCATCTACAGTTTTGGCCCAGAAGACAACAATGGCGGCCCTACGTCAGCTAAGGCAGATTTCTCATGAAGTTTCTCAGTCTAATGTCACTGGGTGGGGCAGACGACCAGCCGCACTTCGAGCACTTGGCCAGAGACTGAGCCGGGGTTTTAATGAGGCACTCAATGGGTTTACTGATGAGGGATGGTCAATGATTGGCAATGATGGTGTTGATGATGTTACTATTCTAGTGAATTCATCACCTGACAAGTTGATGGGTCTGAATCTTTCCTTTGCTAATGGTTTTCCATCTGTCAGTAATGCTGTTTTATGTGCCAAAGCCTCAATGCTATTGCAGAATGTGCCTCCAGCCATTTTGCTGAGGTTCCTGCGGGAGCACAGGTCAGAATGGGCAGACAATAACATGGATGCTTACTCAGCTGCTGCCATTAAAGTTGGTCCTTGTAGCTTATCAGGATCTCGTGTTGGAAATTATGGGGGTCAAGTTATTCTTCCTCTAGCCCACACCATCGAGCATGAGGAGTTTCTGGAAGTCATTAAATTAGAAGGAGTCGCTCATTCTCCTGAAGAAGCGATGATGCCCAGAGAAGTGTTTCTTTTGCAACTCTGTAGTGGAATGGATGAGAATGCAGTTGGCACGTGTGCTGAGCTCATATTTGCTCCAATTGATGCATCCTTTGCTGATGATGCCCCCCTTCTGCCTTCTGGATTTCGCATCATTCCTCTTGATTCTGGAAAGGAAGCGTCCAACCCAAATCGCACCCTTGACCTTGCATCTGCCCTTGATGTTGGCCCCACAGGAAACAAAGCATCAAATGATTATTCTGGAAATTCTGGCTCTATGAGATCTGTGATGACCATAGCATTTGAATTTGCATTCGAAAGTCATATGCAAGATCATGTTGCATCCATGGCACGCCAATATGTTCGCAGCATCATATCATCGGTCCAAAGGGTTGCATTAGCGCTTTCACCTTCTCATCTGAGTTCACAAGCTGGGCTTAGGACACCACTGGGTACTCCTGAAGCACAAACCCTTGCTCGTTGGATCTGCAATAGTTATAGATGCTACTTGGGTGTGGAGCTACTCAAATCTAACAATGAGGGGAACGAATCTCTACTAAAATCCTTGTGGCATCATTCAGATGCAATATTGTGCTGCACTCTTAAGGCATTGCCAGTGTTCACTTTTGCAAACCAGGCAGGGCTCGACATGCTTGAGACTACCTTAGTTGCACTACAAGATATAACCCTGGAGAAAATATTTGATGATCATGGCCGAAAGATTCTCTGCTCAGAGTTTCCCCAAATTGTTCAACAGGGTTTTGCATGCCTTCAAGGAGGTATCTGTCTGTCAAGCATGGGGAGACCAATCTCGTATGAAAGAGTAGTTGCTTGGAAGGTGCTGAATGAAGAAGAGAATGCTCACTGTATTTCCTTTATGTTTGTGAACTGGTCTTTCGTTTGA 2517 0.4732 MSMSCKDGKHGGLDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEALRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNTTLPTKDTSCESAVTSGQRSLTNQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNTQNGPSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVLAQKTTMAALRQLRQISHEVSQSNVTGWGRRPAALRALGQRLSRGFNEALNGFTDEGWSMIGNDGVDDVTILVNSSPDKLMGLNLSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNMDAYSAAAIKVGPCSLSGSRVGNYGGQVILPLAHTIEHEEFLEVIKLEGVAHSPEEAMMPREVFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASNPNRTLDLASALDVGPTGNKASNDYSGNSGSMRSVMTIAFEFAFESHMQDHVASMARQYVRSIISSVQRVALALSPSHLSSQAGLRTPLGTPEAQTLARWICNSYRCYLGVELLKSNNEGNESLLKSLWHHSDAILCCTLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKILCSEFPQIVQQGFACLQGGICLSSMGRPISYERVVAWKVLNEEENAHCISFMFVNWSFV* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1610 838 Gene3D - 10 81 - -
Aev10g1610 838 SMART HOX_1 14 80 IPR001356 GO:0003677
Aev10g1610 838 Pfam Homeodomain 17 75 IPR001356 GO:0003677
Aev10g1610 838 MobiDBLite consensus disorder prediction 122 154 - -
Aev10g1610 838 ProSiteProfiles START domain profile. 151 366 IPR002913 GO:0008289
Aev10g1610 838 SUPERFAMILY Homeodomain-like 16 79 IPR009057 -
Aev10g1610 838 Coils Coil 82 113 - -
Aev10g1610 838 Pfam MEKHLA domain 695 837 IPR013978 -
Aev10g1610 838 ProSiteProfiles 'Homeobox' domain profile. 12 76 IPR001356 GO:0003677
Aev10g1610 838 Pfam START domain 161 369 IPR002913 GO:0008289
Aev10g1610 838 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 838 IPR044830 GO:0003700
Aev10g1610 838 MobiDBLite consensus disorder prediction 122 150 - -
Aev10g1610 838 CDD bZIP 69 108 - -
Aev10g1610 838 CDD START_ArGLABRA2_like 155 370 - -
Aev10g1610 838 CDD homeodomain 17 77 IPR001356 GO:0003677
Aev10g1610 838 PANTHER CLASS III HD-ZIP PROTEIN CNA1 1 838 - -
Aev10g1610 838 SUPERFAMILY Bet v1-like 160 369 - -
Aev10g1610 838 SMART START_1 160 370 IPR002913 GO:0008289
Aev10g1610 838 Gene3D - 195 376 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1610 Aev-Chr10 18693633 18698793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1610 1 790 Homeobox Transcription Factor Family AT1G52150 86.995 0.0 1433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev10g1610 START 2.5e-54 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1610 K09338 - zju:107428556 1601.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1610 10 18693633 18698793 Aev10g1610 10 18693633 18698793 ECH