Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev10g1609 | ATGGAATTGCCGGAATACTTTCTTGCTGGCTATTTCGTCACCGGAGCAGACCACATGTCGCCGGAAAAGCGCCATGGCGACCAAAACCAGGGCGACATTTTCGCCATCGACGACCTCCTTGACTTTTCCAGCGCCGACGCCGTCATGTCCGACAATGCCGTCGGCAACTCCAACGACTCCTCCGCCATCACCGCCGTTTACAGCTGCAACTCCTCCATTTCTGGCGGTGACAACCATTTCACCGACACAAATATCTTCGCCGCCTCGGAGCCTCAGTTCGCCGGAGAACTTTGCGTTCCGTATGAGGACATTGCAGAACTGGAATGGCTCTCGAATTTCGTGGAGGAGTTGTTCCCGGCGGAGGACGATGAGCTGAAAACGCTGCACCTTATCTCCGGCGTTAAGCCGCAGACACCTGAGTGCTCCTCTTCCTCCGACGCGCAAAACGCACCGTTTTTCCACTCCGAAACGCCGCTACCAGGCAAGGCACGCAGCAAGCGCTCACGCGCTGCGCCTGGTGATTGGTCCACGCGCTTGCTTCCCCTTGTTAAAGCGAAACCCGCGAAGAAGAGGGATGGGCCCAACCTGGAGCCTACGGGCCGGAAATGCCTGCATTGCGCTGCCGAGAAGACGCCGCAGTGGCGTACTGGGCCCATGGGCCCAAAGACGCTATGCAACGCGTGCGGGGTCCGTTACAAGTCCGGGAGGTTGGTGCCAGAGTACAGGCCCGCGGCGAGCCCAACGTTCGTTTCGACGAAGCATTCGAATTCGCATAGGAAGGTGTTGGAGCTAAGGAGGCAGAATGAGCTGCAGCAACGGCTGCATCCACACCATTTGATTAATCAGAGTTCATTTTTCGGCGTATCCAACGGTGGAGATGCGTACTTAATCCACCACCGCAACGGTCCTGATTTTAGGCACGTCATCTAG | 930 | 0.572 | MELPEYFLAGYFVTGADHMSPEKRHGDQNQGDIFAIDDLLDFSSADAVMSDNAVGNSNDSSAITAVYSCNSSISGGDNHFTDTNIFAASEPQFAGELCVPYEDIAELEWLSNFVEELFPAEDDELKTLHLISGVKPQTPECSSSSDAQNAPFFHSETPLPGKARSKRSRAAPGDWSTRLLPLVKAKPAKKRDGPNLEPTGRKCLHCAAEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSTKHSNSHRKVLELRRQNELQQRLHPHHLINQSSFFGVSNGGDAYLIHHRNGPDFRHVI* | 310 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev10g1609 | 309 | CDD | ZnF_GATA | 202 | 249 | IPR000679 | GO:0006355|GO:0043565 | |
Aev10g1609 | 309 | ProSitePatterns | GATA-type zinc finger domain. | 203 | 228 | IPR000679 | GO:0006355|GO:0043565 | |
Aev10g1609 | 309 | SMART | GATA_3 | 197 | 247 | IPR000679 | GO:0006355|GO:0043565 | |
Aev10g1609 | 309 | PANTHER | GATA TRANSCRIPTION FACTOR | 1 | 309 | - | - | |
Aev10g1609 | 309 | Pfam | GATA zinc finger | 203 | 236 | IPR000679 | GO:0006355|GO:0043565 | |
Aev10g1609 | 309 | PANTHER | GATA TRANSCRIPTION FACTOR 9 | 1 | 309 | - | - | |
Aev10g1609 | 309 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 198 | 261 | - | - | |
Aev10g1609 | 309 | MobiDBLite | consensus disorder prediction | 137 | 174 | - | - | |
Aev10g1609 | 309 | MobiDBLite | consensus disorder prediction | 137 | 152 | - | - | |
Aev10g1609 | 309 | Gene3D | - | 198 | 247 | IPR013088 | GO:0006355|GO:0008270 | |
Aev10g1609 | 309 | ProSiteProfiles | GATA-type zinc finger domain profile. | 197 | 233 | IPR000679 | GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev10g1609 | Aev-Chr10 | 18685722 | 18686770 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev10g1609 | 32 | 309 | C2C2-Gata Transcription Factor Family | AT4G32890 | 46.753 | 1.94e-78 | 239 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-GATA | Aev10g1609 | GATA | 1.8e-14 | CL0167 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev10g1609 | - | - | gmx:100776605 | 433.335 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev10g1609 | 10 | 18685722 | 18686770 | Aev10g1609 | 10 | 18685722 | 18686770 | ECH |