Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1609 ATGGAATTGCCGGAATACTTTCTTGCTGGCTATTTCGTCACCGGAGCAGACCACATGTCGCCGGAAAAGCGCCATGGCGACCAAAACCAGGGCGACATTTTCGCCATCGACGACCTCCTTGACTTTTCCAGCGCCGACGCCGTCATGTCCGACAATGCCGTCGGCAACTCCAACGACTCCTCCGCCATCACCGCCGTTTACAGCTGCAACTCCTCCATTTCTGGCGGTGACAACCATTTCACCGACACAAATATCTTCGCCGCCTCGGAGCCTCAGTTCGCCGGAGAACTTTGCGTTCCGTATGAGGACATTGCAGAACTGGAATGGCTCTCGAATTTCGTGGAGGAGTTGTTCCCGGCGGAGGACGATGAGCTGAAAACGCTGCACCTTATCTCCGGCGTTAAGCCGCAGACACCTGAGTGCTCCTCTTCCTCCGACGCGCAAAACGCACCGTTTTTCCACTCCGAAACGCCGCTACCAGGCAAGGCACGCAGCAAGCGCTCACGCGCTGCGCCTGGTGATTGGTCCACGCGCTTGCTTCCCCTTGTTAAAGCGAAACCCGCGAAGAAGAGGGATGGGCCCAACCTGGAGCCTACGGGCCGGAAATGCCTGCATTGCGCTGCCGAGAAGACGCCGCAGTGGCGTACTGGGCCCATGGGCCCAAAGACGCTATGCAACGCGTGCGGGGTCCGTTACAAGTCCGGGAGGTTGGTGCCAGAGTACAGGCCCGCGGCGAGCCCAACGTTCGTTTCGACGAAGCATTCGAATTCGCATAGGAAGGTGTTGGAGCTAAGGAGGCAGAATGAGCTGCAGCAACGGCTGCATCCACACCATTTGATTAATCAGAGTTCATTTTTCGGCGTATCCAACGGTGGAGATGCGTACTTAATCCACCACCGCAACGGTCCTGATTTTAGGCACGTCATCTAG 930 0.572 MELPEYFLAGYFVTGADHMSPEKRHGDQNQGDIFAIDDLLDFSSADAVMSDNAVGNSNDSSAITAVYSCNSSISGGDNHFTDTNIFAASEPQFAGELCVPYEDIAELEWLSNFVEELFPAEDDELKTLHLISGVKPQTPECSSSSDAQNAPFFHSETPLPGKARSKRSRAAPGDWSTRLLPLVKAKPAKKRDGPNLEPTGRKCLHCAAEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVSTKHSNSHRKVLELRRQNELQQRLHPHHLINQSSFFGVSNGGDAYLIHHRNGPDFRHVI* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1609 309 CDD ZnF_GATA 202 249 IPR000679 GO:0006355|GO:0043565
Aev10g1609 309 ProSitePatterns GATA-type zinc finger domain. 203 228 IPR000679 GO:0006355|GO:0043565
Aev10g1609 309 SMART GATA_3 197 247 IPR000679 GO:0006355|GO:0043565
Aev10g1609 309 PANTHER GATA TRANSCRIPTION FACTOR 1 309 - -
Aev10g1609 309 Pfam GATA zinc finger 203 236 IPR000679 GO:0006355|GO:0043565
Aev10g1609 309 PANTHER GATA TRANSCRIPTION FACTOR 9 1 309 - -
Aev10g1609 309 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 198 261 - -
Aev10g1609 309 MobiDBLite consensus disorder prediction 137 174 - -
Aev10g1609 309 MobiDBLite consensus disorder prediction 137 152 - -
Aev10g1609 309 Gene3D - 198 247 IPR013088 GO:0006355|GO:0008270
Aev10g1609 309 ProSiteProfiles GATA-type zinc finger domain profile. 197 233 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1609 Aev-Chr10 18685722 18686770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1609 32 309 C2C2-Gata Transcription Factor Family AT4G32890 46.753 1.94e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev10g1609 GATA 1.8e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1609 - - gmx:100776605 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1609 10 18685722 18686770 Aev10g1609 10 18685722 18686770 ECH