Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1603 ATGACAGCAACTACCTGTTCTGAAGCTTCTACTACCAGCAACTCCTCCACGGCTACTACTTCTTCAAACTCCAATAGTAACAGCAACACGAAACTAAAGAAAACAGGGGCTCAAAAACAGAGCAACCCCAAGAAGCCCAGAGACTGCAGCAAGCACCCGGTTTACCACGGCGTACGAATGCGCAATTGGGGCAAATGGGTCTCCGAAATTCGCGAGCCACGCAAGAAATCACGCATCTGGCTCGGTACTTTCGCTACCCCTGAAATGGCAGCAAGAGCACACGACGTTGCGGCTTTGAGCATTAAGGGCAAAGCAGCGATTCTCAACTTCCCCAAGATAGCTGAATTGCTCCCAAGACCCCTCACGCCGACCCCACGTGACATCCAATCCGCGGCTGCAGAAGCTGCTGCCATGGTGGAATTCGACCACGACCCTGTTCTGTCACCTTCCTCTGTTTCGGAAGAAGAAGAAGATGAAGGGTCAGAGTCCTCGGAGCTGAGCGAGATTGTTGAGCTTCCAAACATAGAAGAGAGCTTCGACTCAGTAGACTCGGGAACTGAGTTCATACTGGTTGACTCGGTGGATAGTTGGGTGTACCCGCCAATGGGGTCGAGCATTTCTGAGATGATGATGTTCGGAGAAGACAATAGTTTTGTCATGGATAGCTCTGCCTCTGAATGCGTGATTCCAACATGGGGTTAA 702 0.51 MTATTCSEASTTSNSSTATTSSNSNSNSNTKLKKTGAQKQSNPKKPRDCSKHPVYHGVRMRNWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAALSIKGKAAILNFPKIAELLPRPLTPTPRDIQSAAAEAAAMVEFDHDPVLSPSSVSEEEEDEGSESSELSEIVELPNIEESFDSVDSGTEFILVDSVDSWVYPPMGSSISEMMMFGEDNSFVMDSSASECVIPTWG* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1603 233 SUPERFAMILY DNA-binding domain 54 111 IPR016177 GO:0003677
Aev10g1603 233 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 16 222 - -
Aev10g1603 233 CDD AP2 55 111 IPR001471 GO:0003700|GO:0006355
Aev10g1603 233 SMART rav1_2 54 117 IPR001471 GO:0003700|GO:0006355
Aev10g1603 233 MobiDBLite consensus disorder prediction 1 43 - -
Aev10g1603 233 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 16 222 - -
Aev10g1603 233 Gene3D AP2/ERF domain 54 113 IPR036955 GO:0003700|GO:0006355
Aev10g1603 233 MobiDBLite consensus disorder prediction 151 165 - -
Aev10g1603 233 Pfam AP2 domain 53 103 IPR001471 GO:0003700|GO:0006355
Aev10g1603 233 MobiDBLite consensus disorder prediction 145 168 - -
Aev10g1603 233 ProSiteProfiles AP2/ERF domain profile. 54 111 IPR001471 GO:0003700|GO:0006355
Aev10g1603 233 MobiDBLite consensus disorder prediction 1 53 - -
Aev10g1603 233 PRINTS Ethylene responsive element binding protein signature 77 93 IPR001471 GO:0003700|GO:0006355
Aev10g1603 233 PRINTS Ethylene responsive element binding protein signature 55 66 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1603 Aev-Chr10 18652989 18653690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1603 10 201 AP2-EREBP Transcription Factor Family AT5G11590 53.659 1.28e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev10g1603 AP2 2.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1603 K09286 - gmx:100787471 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1603 10 18652989 18653690 Aev10g1603 10 18652989 18653690 ECH