Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1595 ATGTCTACACCATTGGAACATGATTACATAGGCTTAGCAGAGAATCCGTCAATGGACGGAACCTCTGACAGGTTATCTTCCTCTGAGGATGGTATCTCCAACAACTCCTCATCATGTCTCAACTTCAAGGAGACAGAGCTGAGGCTTGGTTTGCCAGGTTCTGACACAAAATCTGCAGCTGGAGCTAGTTTGTCCCTCTTTGGGAAGGACTTGCAGAAGCAGAACAAGCATTCTGCTGTTTCTGGAACCCCTTTGAAGAACCTTGTTGCTGGGGCCAAGAGGGGCTTCTCTGATGCCATTGATGCCTCTTCTGGGAAATGGGGTCTCTCTGTTACTGATGGATCTGAAGCTCCCCTGTTCTCCCCTAGAACTGGGAATGTTGTGAAGCCCCTTCTTGCTTTGGAGGCTAAAACAACCACACAAAAGGCTAATAATACCACTGCTGCTGTTGCACAAAACATCAAAGAGTCTCAATCTGCCAAGCCAGTTCAGGAAAAGGTTTCTGAGCATGGTACTGCTCCTCCTGCTGCAAAGGCGCAGGTTGTGGGTTGGCCACCAATTCGATCTTTCCGGAAGAACTCGATGGCCTCTAATTTGACAAAGAACAATGATGAAGCTGAAGGGAAACCAGGACTTGGTTGTCTTTATGTTAAGGTCAGCATGGATGGTGCTCCTTATCTCAGGAAGGTTGATCTGAAAACCTACAGCAACTATAAGGAACTTTCTTCAGCTCTTGAGAAGATGTTCAGCTGCTTCACCATTGGTCAATGCAACTCTCCTGGGTTTCCTGGGAAAGATGGACTAAGTGAGAGCTCTTTGAGGGATCTTCTGCATGGCTCTGAATATGTTCTTACATATGAAGATAAGGATGGAGATTGGATGCTTGTGGGTGATGTTCCTTGGGGGATGTTCACAGATTCATGTAGGAGACTAAGGATCATGAAAGGCTCTGAGGCAATTGGGCTAGCTCCAAGGGCAGTGGAAAAATCTAGGAGCCAAAACTAG 1005 0.4677 MSTPLEHDYIGLAENPSMDGTSDRLSSSEDGISNNSSSCLNFKETELRLGLPGSDTKSAAGASLSLFGKDLQKQNKHSAVSGTPLKNLVAGAKRGFSDAIDASSGKWGLSVTDGSEAPLFSPRTGNVVKPLLALEAKTTTQKANNTTAAVAQNIKESQSAKPVQEKVSEHGTAPPAAKAQVVGWPPIRSFRKNSMASNLTKNNDEAEGKPGLGCLYVKVSMDGAPYLRKVDLKTYSNYKELSSALEKMFSCFTIGQCNSPGFPGKDGLSESSLRDLLHGSEYVLTYEDKDGDWMLVGDVPWGMFTDSCRRLRIMKGSEAIGLAPRAVEKSRSQN* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1595 334 PANTHER AUXIN-RESPONSIVE PROTEIN 5 326 - -
Aev10g1595 334 MobiDBLite consensus disorder prediction 19 38 - -
Aev10g1595 334 SUPERFAMILY CAD & PB1 domains 214 315 - -
Aev10g1595 334 MobiDBLite consensus disorder prediction 155 179 - -
Aev10g1595 334 Gene3D - 211 328 - -
Aev10g1595 334 ProSiteProfiles PB1 domain profile. 214 316 IPR000270 GO:0005515
Aev10g1595 334 MobiDBLite consensus disorder prediction 1 38 - -
Aev10g1595 334 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 5 326 IPR003311 GO:0005634|GO:0006355
Aev10g1595 334 Pfam AUX/IAA family 44 325 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1595 Aev-Chr10 18612991 18614855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1595 218 324 B3 DNA Binding Superfamily AT4G23980 29.907 6.15e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Aev10g1595 AUX_IAA 2.5e-92 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1595 K14484 - gmx:100804423 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1595 10 18612991 18614855 Aev10g1595 10 18612991 18614855 ECH