Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1572 ATGGATTTTTGGCCAGAGTTTCTTGCGAGCAGTTGGGGTAAAGAGTTTATAGCAGGAGGGTTTGGTGGGAGTGCTGGTATAATCTCTGGTTACCCTCTGGACACACTACGCATCATGCAGCAGCAGAATTCGAGAACCGGCTCTGCTTTCGACATCCTCAGAAATGTGCTAGCCAAGGAAGGACCAGCTTCACTCTACCGTGGCATGGCTGCCCCTTTGGCCTCTGTTACTTTTCAGAACGCTATGGTATTCCAAACATATGCAGTACTTTCAAGGGCATTCAGCTCCTCCTCATCATCATCATCTGACCCTCCATCCTTGAAGGGTGTTGCTTTAGGAGGATTTTGTACAGGTGCTCTCCAAAGCATACTGCTTTCCCCTGTTGAGTTGCTCAAAATTCGCCTTCAACTTCAGAACACAACCCAATTCTCCTCCTCCTCTGAGTCCCAAAAGCCTGGTGGCGTAGCAAGCTGGGTTTTGAGCTACCCTTTGGATGTTATAAAGACAAGACTCCAAGCACAAACACCTTCTTCACTGAAATACAGTGGCATTTTAGATTGCCTCATAAAGAGCACCAAGGAAGAAGGGTATGTTGTGCTTTGGAGGGGCTTAGGAACTGCTGTTGCCAGAGCCTTTGTAGTGAATGGTGCTATATTCTCTGCCTATGAGATTACTCTCAGATGCTTGTTCAGTAATAATTGA 702 0.4672 MDFWPEFLASSWGKEFIAGGFGGSAGIISGYPLDTLRIMQQQNSRTGSAFDILRNVLAKEGPASLYRGMAAPLASVTFQNAMVFQTYAVLSRAFSSSSSSSSDPPSLKGVALGGFCTGALQSILLSPVELLKIRLQLQNTTQFSSSSESQKPGGVASWVLSYPLDVIKTRLQAQTPSSLKYSGILDCLIKSTKEEGYVVLWRGLGTAVARAFVVNGAIFSAYEITLRCLFSNN* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1572 233 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 150 - -
Aev10g1572 233 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 154 231 - -
Aev10g1572 233 ProSiteProfiles Solute carrier (Solcar) repeat profile. 141 228 IPR018108 -
Aev10g1572 233 Pfam Mitochondrial carrier protein 153 232 IPR018108 -
Aev10g1572 233 Pfam Mitochondrial carrier protein 11 96 IPR018108 -
Aev10g1572 233 SUPERFAMILY Mitochondrial carrier 11 223 IPR023395 -
Aev10g1572 233 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 93 IPR018108 -
Aev10g1572 233 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 154 231 - -
Aev10g1572 233 Gene3D Mitochondrial carrier domain 153 233 IPR023395 -
Aev10g1572 233 Gene3D Mitochondrial carrier domain 5 151 IPR023395 -
Aev10g1572 233 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1572 Aev-Chr10 18500378 18502252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1572 1 233 Antiporters AT1G79900 54.296 1.94e-86 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1572 K15109 - gmx:100801221 225.713