Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1542 ATGGAGAAAGAAGGTCTTGGACTTGAAATCACGGAGTTAAGGTTGGGTCTACCCGGTGGCGAACCAACAACATGTGTAGCGGTGGACAAGAAGAATAACAATAATAATAACGAGAACAATAAGAAGAGGAAGTTCTCTGAGATTGATGGAGACCAAAACAGCTCGTCCGATGACCGGAAAACTCATCATGAGACAAAGAGCCAAGTGGTGGGGTGGCCTCCGGTGTGCTCGTACCGGAAGAAGAAAAACGTGAATAATAGTGAGACCTCGAAAATGTACATAAAAGTGAGCATGGACGGTGCTCCATTCTTGCGTAAAATTGATTTAGGCATGCACAAGGGCTACTCTGACTTGGCCTTTGCCTTGGAGAACCTCTTTGGCTGCTATGGAATCGGGGAGGCGTTGAAGGATGGGGAGAAGGGAGATCATGTTCCCATTTACGAGGACAAAGACGCTGACTGGATGCTCGTTGGTGATGTCCCTTGGCAGATGTTTATTGAATCATGCAAGCGGTTGAGGATTATGAAGAGATCGGACGCAAAGGGATTCGGTCTGCAACCAAAAGGGTCTTTAAAGGGATTTATAGAAGGCGTGACAAAGTGA 603 0.466 MEKEGLGLEITELRLGLPGGEPTTCVAVDKKNNNNNNENNKKRKFSEIDGDQNSSSDDRKTHHETKSQVVGWPPVCSYRKKKNVNNSETSKMYIKVSMDGAPFLRKIDLGMHKGYSDLAFALENLFGCYGIGEALKDGEKGDHVPIYEDKDADWMLVGDVPWQMFIESCKRLRIMKRSDAKGFGLQPKGSLKGFIEGVTK* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1542 200 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 183 IPR003311 GO:0005634|GO:0006355
Aev10g1542 200 PANTHER AUXIN-RESPONSIVE PROTEIN IAA6 4 183 - -
Aev10g1542 200 MobiDBLite consensus disorder prediction 17 68 - -
Aev10g1542 200 Pfam AUX/IAA family 11 183 IPR033389 -
Aev10g1542 200 ProSiteProfiles PB1 domain profile. 91 179 IPR000270 GO:0005515
Aev10g1542 200 SUPERFAMILY CAD & PB1 domains 83 176 - -
Aev10g1542 200 MobiDBLite consensus disorder prediction 35 66 - -
Aev10g1542 200 Gene3D - 85 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1542 Aev-Chr10 18341316 18343925 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1542 48 198 B3 DNA Binding Superfamily AT4G23980 27.815 1.31e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Aev10g1542 AUX_IAA 4.8e-46 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1542 K14484 - gmx:100811879 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1542 10 18341316 18343925 Aev10g1542 10 18341316 18343925 ECH
Aev09g0194 09 1623159 1626815 Aev10g1542 10 18341316 18343925 PCT