Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1541 ATGTCGGCGCAAAGAAGAGAAAGTGGGAATGGTGATGAGGTGGTGATGAAGAAGTTGAAGGAGGATATAGAGCTGAGCCTCTCCCTTCCCGGAACCAATAAAACCACTAGCACCGGCGGCACAAAACGTGGCTTCTCTGACCACGACGACGACACCGCCCTTGAGCTTCATCTTGGCACATCCTCATCCACCACTCATCATCAACTATTCTCATCCTCTTCCTCCTCATCCTCATCCTCATCCTCATCCTCATCCTCCTCCACCTATAATAAACCCCCACCACCCAAGGCACAAGTGGTGGGATGGCCACCAGTGAGAGCGAAGAGGAGGGTGAATGGCCACACAAGTAGCTGCAAGTACTACGTGAAGGTGGCTGTTGATGGAGCGCCCTATCTAAGGAAAGTGGATCTGCAAATGTACCAGAGTTATCAGCACCTCCTCACCGCATTGGACTCCATCTTTTCTTCCTTAACCATTCTTCATCGTACGAGTGATTTGAAAGAGAGTGGAAGTGAGTACATGGCTACCTATGAGGACAAAGATGGTGACTGGATGTTGCTCGGTGATGTTCCCTGGAAGGTTCTCCATGAAGTAGATGGAAGTAGCTGTTTCCGTGTTCGTTTTGCTATTTGCGCAGTGGAGATCTTGCACGACGAAGACCGTGGTTGGGGGACGATTTCCTCTGTGTACATCTCTTATGGCCGTACGATGAGGCATCTTTTTCCACGCACACGATGA 738 0.5014 MSAQRRESGNGDEVVMKKLKEDIELSLSLPGTNKTTSTGGTKRGFSDHDDDTALELHLGTSSSTTHHQLFSSSSSSSSSSSSSSSSSTYNKPPPPKAQVVGWPPVRAKRRVNGHTSSCKYYVKVAVDGAPYLRKVDLQMYQSYQHLLTALDSIFSSLTILHRTSDLKESGSEYMATYEDKDGDWMLLGDVPWKVLHEVDGSSCFRVRFAICAVEILHDEDRGWGTISSVYISYGRTMRHLFPRTR* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1541 245 MobiDBLite consensus disorder prediction 56 93 - -
Aev10g1541 245 SUPERFAMILY CAD & PB1 domains 115 197 - -
Aev10g1541 245 Gene3D - 114 209 - -
Aev10g1541 245 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 19 208 IPR003311 GO:0005634|GO:0006355
Aev10g1541 245 PANTHER AUXIN-RESPONSIVE PROTEIN IAA15 19 208 - -
Aev10g1541 245 MobiDBLite consensus disorder prediction 28 42 - -
Aev10g1541 245 ProSiteProfiles PB1 domain profile. 119 221 IPR000270 GO:0005515
Aev10g1541 245 Pfam AUX/IAA family 32 195 IPR033389 -
Aev10g1541 245 MobiDBLite consensus disorder prediction 23 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1541 Aev-Chr10 18333115 18334991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1541 115 193 B3 DNA Binding Superfamily AT5G62000 31.646 3.00e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Aev10g1541 AUX_IAA 3.1e-37 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1541 K14484 - qsu:112027116 154.066