Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1538 ATGTATCGAACGGCGGCGTTTAAACGGCGAGTGAACGGAGGAAGAGGGGAGCTGGGTGAAATGACAGAAGAGCCCCTGGGAGTTTCTGGTATTGACGGTTTGGGCCAGGCAACGGTTGGTTCGGGGATTGGGTGGGCTTTTTGGTTTGAGTGGAAAAAGACTAAAAGTAAATGCCACCTTCTCCAAGAGGGGAGAGAGCTTCCAAAACAGATTTCTCTGTTCTTGACTAGGCTTTTTACGCGGCCCCATGTAGGTTCCAGTTGGGTTGCCAGGATTTACAACAGTAACCAGCTTTGGGGCAGAGATTTTAAACCCAAACCCAAATCCCGCTCTCGCTTATTCCTCATCTCATCTTCTTATTCCATAGCTGTCTCCAACAAACACTGCGTAGGAACTGTTTCTGTGACTGTGACTGTGACTGTGACTGTGAGCTCTCATCTATCTCTTCAATGGAGGTCGTGGAGCTCGCAGTATAGACCCCAGGATTCACAGATCAAAATTTTAGTGTCCATACTTTTTTTTTCTGTTCTATTGAATCTTGTAGACATGAAGAAAGAAAATAGTGTAAACTTGAAAGCTGGAGACCTCCCAGGTCGACTGACTCGTGCTCGAGCTGCTTCCTTTCGTGCATCTGGACAGTTGCCCCCTTTGAAGGGGGTATCAGTATCACAACAAAGTCAGAAGCAGATCCTACCAGCCAAGCCAAAAAGAGCACTTTCAGAAAATGCATGTCCTCCACCTAAAAAGAGGGCTGTTCTTCAGGATGTCAGTAACATTCGGTGTGAAAATACACAGAGGAGATCTTTGAATGCAACTAAAATTCAGGCTAAGAAAAACAATCTGGATAAGGCTGGTCAACTCAATGCTAAGAAAAGCAAGCTGGATAAGGTTGTGGAGCTACCACAACTGCAAATTGATTCAAGAGGGAAGAGTTTGCCAGAAACAGGGCTTGGATCAGAAGAAGCCATGTGTTCAGTCAATTTGGAAGACAATGCACTTCGGGTGAGTGTCAACCAGTGTGGCGCAGATAATAGTCTGCTTGATAGTCAGACATCGGGAGTATCTTCTCAGCTTTTGATTTCTCAAAAGAAAGGTGTACAAATTGAGGTAACAAAGAAAACTAGCCTTCACATTCTTCCAAATGCATCAAAGGATCCCAATGTCACTAATATAGATGCAGATTTTGAAGATCCTCAATTGTGCTGCCTCTATGCCTCGGATATCTATGACAACTTGCGTCTTGCTGAGCTGTCAAGAAGGCCTTATCCTAACTATATGGAGGCAGTACAGCAAGACATCACTCAAAGCATGCGTGGGATACTGGTTGATTGGCTTGTAGAGGTTTCCGAGGAATACAAATTGGTTCCAGACTCTCTTTACCTCACTGTATATCTCATGGATTGGTTTCTCTCCAAAAATTACATTGAAAGAGGAAGACTTCAGCTGCTTGGCATCACCTGCATGCTTATTGCCTCGAAATATGAAGAAATAAATGCCCCACGTATTGAAGAATTCTGCTTCATCACAGACAACACATACTCAAAAGAGGAGGTACTGATAATGGAGATCCAAGTGTTAAAGTCCTCCGCATATCAACTATTTGCTCCCACAACAAAAACTTTCCTCAGGAGGTTTCTTCGAGCAGCACAAGCTTCTTACAAGAAACCTAGCTTTGAATTGGAGTACCTTGCCAATTATCTCGCCGAACTAACACTCGTTCACTATGATTTCTTAAATTTCCTTCCTTCTTTGATAGCAGCATCTGCTGTATTTCTTGCCAGATGGACGTTAGATCAGTCAAGCCACCCCTGGAACCCAACTCTTCAACACTATACCTCTTACAAACCATCAGATTTGAAAACCACAGTTCATGCATTGCGGGATCTACAGAAGAATAGCAGCGGCTGCCCTTTAACGGCCATTCGCACCAAGTACAGGCAAGACAAGTTTAAATGTGTAGCAGCTTTGCCTTCACCAGAACTGCTTGAGACTCTCTTCTAA 2001 0.4403 MYRTAAFKRRVNGGRGELGEMTEEPLGVSGIDGLGQATVGSGIGWAFWFEWKKTKSKCHLLQEGRELPKQISLFLTRLFTRPHVGSSWVARIYNSNQLWGRDFKPKPKSRSRLFLISSSYSIAVSNKHCVGTVSVTVTVTVTVSSHLSLQWRSWSSQYRPQDSQIKILVSILFFSVLLNLVDMKKENSVNLKAGDLPGRLTRARAASFRASGQLPPLKGVSVSQQSQKQILPAKPKRALSENACPPPKKRAVLQDVSNIRCENTQRRSLNATKIQAKKNNLDKAGQLNAKKSKLDKVVELPQLQIDSRGKSLPETGLGSEEAMCSVNLEDNALRVSVNQCGADNSLLDSQTSGVSSQLLISQKKGVQIEVTKKTSLHILPNASKDPNVTNIDADFEDPQLCCLYASDIYDNLRLAELSRRPYPNYMEAVQQDITQSMRGILVDWLVEVSEEYKLVPDSLYLTVYLMDWFLSKNYIERGRLQLLGITCMLIASKYEEINAPRIEEFCFITDNTYSKEEVLIMEIQVLKSSAYQLFAPTTKTFLRRFLRAAQASYKKPSFELEYLANYLAELTLVHYDFLNFLPSLIAASAVFLARWTLDQSSHPWNPTLQHYTSYKPSDLKTTVHALRDLQKNSSGCPLTAIRTKYRQDKFKCVAALPSPELLETLF* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1538 666 CDD CYCLIN 437 526 IPR013763 -
Aev10g1538 666 SMART Cyclin_C_2 536 659 IPR004367 -
Aev10g1538 666 Gene3D - 407 655 - -
Aev10g1538 666 PANTHER CYCLIN-A2-4 227 666 - -
Aev10g1538 666 SUPERFAMILY Cyclin-like 536 661 IPR036915 -
Aev10g1538 666 CDD CYCLIN 536 626 IPR013763 -
Aev10g1538 666 SUPERFAMILY Cyclin-like 396 528 IPR036915 -
Aev10g1538 666 SMART cyclin_7 443 527 IPR013763 -
Aev10g1538 666 SMART cyclin_7 540 628 IPR013763 -
Aev10g1538 666 MobiDBLite consensus disorder prediction 216 248 - -
Aev10g1538 666 Gene3D - 421 534 - -
Aev10g1538 666 Pfam Cyclin, N-terminal domain 407 528 IPR006671 -
Aev10g1538 666 Pfam Cyclin, C-terminal domain 536 658 IPR004367 -
Aev10g1538 666 MobiDBLite consensus disorder prediction 217 231 - -
Aev10g1538 666 PANTHER CYCLINS 227 666 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1538 Aev-Chr10 18315790 18326151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1538 183 666 Core Cell Cycle Gene Families AT1G80370 52.333 4.27e-163 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1538 K06627 - gmx:100789757 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1538 10 18315790 18326151 Aev10g1538 10 18315790 18326151 ECH