Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1537 ATGAGTGGAGCTTCGTTAGCAGGGTTACAAGACCACCTCAAATTGGCGCGAGAATACGCCGTCGAAGGACTCTACGACACTTCCATCATCTTCTTCGACGGCGCCGTTGCACAGATCAACAAGCACCTGAACAGTGTTGAAGATCCCTTAATCCGTGCGAAATGGATGAACGTGAAGAAAGCTTTGTCGGAGGAAACGGAAGTGGTGAAGCAACTGGATGCGGAGAGAAGGGCATTCAAGGAAACCCCTATCGGAGGTGGTGGAGGGAGGAGACGCCCTGCTTCGCCTCCGATTTCGACCAAATCATCCTTCGTTTTTCAGCCGTTGGATGAGTATCCTACTTCTTCATCCAGCGGTCCAGGTCCCATGGACGATCCCGATGTGTGGAGGCCGCCCAGTCGAGATTCTTCCATGGCCGGGAGTAGAAGGCCCGGTGCTGCCGCCAGGACCACTCGCAAGTCCCCTCAGGATGGGGCTTGGGCCCGTGGAGGACCCACAAGGCCTGCTGCAGGTGGTCGCGGTGGTGCGAAGGCTGGTGCTACGAGTAGGGTTAATTCGGGAGCCCGAGCTTCAACCACTGCGAAGAAAGGCACCGGAAAGTCTAGCAAGACAGATTCAGCTAATGGTGATGGTGATGAAGGGAAGTCAAAGAAGGGGCAATACGAAGGGCCTGATCCTGACTTGGCTGAGATGCTTGAAAGGGACGTGTTGGAGACTTCTCCTGGTGTGAGATGGGATGATGTTGCAGGCCTTACTGAAGCCAAAAGGCTTCTTGAAGAAGCTGTTGTGCTTCCCTTATGGATGCCCGAGTATTTTCAGGGAATTAGGAGACCGTGGAAAGGCGTTCTCATGTTTGGTCCTCCAGGAACTGGGAAGACCCTTCTTGCTAAAGCGGTTGCTACTGAATGTGGTACCACTTTCTTTAATGTTTCTTCTGCTACTTTAGCTTCTAAATGGCGTGGTGAGAGTGAACGCATGGTACGGTGTTTATTCGATCTTGCAAGAGCATATGCACCGAGTACAATTTTCATTGATGAAATTGATTCCCTATGCAATGCTAGGGGGGCTTCTGGGGAGCATGAATCATCCAGAAGGGTGAAGTCTGAACTTCTAGTTCAGGTTGATGGTGTAAACAATAGTTCCACAAATGAAGATGGCAGCCGTAAAATAGTAATGGTTTTGGCAGCAACCAACTTTCCATGGGACATAGATGAGGCACTAAGGAGAAGGCTGGAAAAGCGAATATATATTCCTCTTCCGAATTTTGAGAGCCGCAAAGAGCTAATTCGTATCAATTTGAAGACTGTAGAGGTGGCCGCTGATGTCAATATAGATGATGTGGCTCGCCGGACAGAGGGCTACAGTGGAGATGATTTGACGAATGTATGCCGTGATGCTTCCTTGAATGGTATGAGGCGTAAGATAGCAGGAAAGACACGTGATGAGATCAAGAACATGCCCAAGGATGAGATTTCAAAGGATCCTGTTGCTATGTGCGATTTTGAAGAAGCCTTGAAGAAAGTCCAACGAAGTGTTTCTCAGGCTGACATTGAACGCCATGAGAAGTGGTTTACTGAATTTGGATCAGCATAA 1593 0.4947 MSGASLAGLQDHLKLAREYAVEGLYDTSIIFFDGAVAQINKHLNSVEDPLIRAKWMNVKKALSEETEVVKQLDAERRAFKETPIGGGGGRRRPASPPISTKSSFVFQPLDEYPTSSSSGPGPMDDPDVWRPPSRDSSMAGSRRPGAAARTTRKSPQDGAWARGGPTRPAAGGRGGAKAGATSRVNSGARASTTAKKGTGKSSKTDSANGDGDEGKSKKGQYEGPDPDLAEMLERDVLETSPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVNNSSTNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVAADVNIDDVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMPKDEISKDPVAMCDFEEALKKVQRSVSQADIERHEKWFTEFGSA* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1537 530 Gene3D - 240 521 IPR027417 -
Aev10g1537 530 SMART AAA_5 278 421 IPR003593 -
Aev10g1537 530 MobiDBLite consensus disorder prediction 78 226 - -
Aev10g1537 530 ProSitePatterns AAA-protein family signature. 391 410 IPR003960 GO:0005524|GO:0016887
Aev10g1537 530 CDD AAA 276 419 - -
Aev10g1537 530 PANTHER AAA DOMAIN-CONTAINING 4 530 - -
Aev10g1537 530 Hamap Meiotic spindle formation protein mei-1 [mei-1]. 7 530 IPR028596 GO:0008017|GO:0008568|GO:0051013
Aev10g1537 530 MobiDBLite consensus disorder prediction 206 226 - -
Aev10g1537 530 Pfam AAA+ lid domain 441 482 IPR041569 -
Aev10g1537 530 Pfam ATPase family associated with various cellular activities (AAA) 282 419 IPR003959 GO:0005524|GO:0016887
Aev10g1537 530 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 242 526 IPR027417 -
Aev10g1537 530 Gene3D - 3 80 - -
Aev10g1537 530 MobiDBLite consensus disorder prediction 184 205 - -
Aev10g1537 530 MobiDBLite consensus disorder prediction 96 121 - -
Aev10g1537 530 PANTHER KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 4 530 - -
Aev10g1537 530 Gene3D - 420 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1537 Aev-Chr10 18312698 18315701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1537 234 522 Calmodulin-binding Proteins AT3G56690 40.000 9.48e-51 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1537 K07767 - mnt:21402373 884.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1537 10 18312698 18315701 Aev10g1537 10 18312698 18315701 ECH