Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1520 ATGGCTTGCATAGACAATTCTTGTGCTTTTAATCACAGTCACAGGCCACACAGACACAGGGCAACCCAACCTGCTTATCAAGCAATAAAGAAGCTTTGCACTCAACATGGAGAAATTAGACTCGATCACTTCCACCTCTTACGCCTCCTAGGCTGCGGGGACATTGGAAAAGTTTTCCTCTGCAAGATTAAGAAATCTTTGAAGCCACAGTCCAACTGTTGTTATGCCATGAAATTAGTTGACAGAGAGTCTCTGAGGTTGAAAAATAAGCTGAAGAGAGCAGACATGGAGGAGCAAGTGTTGAGTATGCTTGATCACCCTTTTCTGCCAACCCTTTATGCAAAATTTGATGCTTGTCAATACTCATGCTTGGTCTTGGATTACTGCCCTGGTGGTGACTTGTTCACACTTCAGCAGCAACAACCAGATCTTCATTTTAGCATCTCCACTGCAAGATTCTTTGCAGCTGAGGTACTTTTGGCTCTTGAGTATCTGCACATGATGGGGATAATATATAGAGACCTGAAGCCAGAAAACGTGCTAATTCAAGAAGATGGACATATCATGCTAATTGACTTTGATCTTTCTCTTCACTTGGAAGTTCACCCAAAGCTTCTAAAACGCGGGCTCCGGCACGATGTCATGAGCAAGAGAATGAAGAAGAAGCCCATGCTGTGTTGCAACACCTCAGATGGAATGCACCCTCAACCTTCAGAAGCAGCACGCGGTGTTGACATTGAAATGTCAGCTGAACCTGTGAATGGAAGATCACATTCATTTGTAGGCACTCATGAGTATTTGGCACCTGAAGTGGTTCTGGGGTTAGGCCATGGAAGTGCAGTGGATTGGTGGGGATTTGGTGTGTTTCTCTATGAGCTGTTATTTGGATTTACACCTTTTAAGGACACAAGAAGCAGTGAGAAAACAATGAAGAATATAATGAGGAAGTCATTGGCATTCCCAAGAAGAACTAATCATCAGTCAAGAGACAGAAAGGATTGTGAGGAGATAGCAAAGGCACAGGACCTCATAGAGAAGCTGCTGGTGAAAAATCCAAAGAAGAGAATGGGATACAACAGGGGATCTTGTGAGATTAAGAAACATGAGTTCTTTGAAGGGGTGAATTGGGCCTTAATCAGATCTCAGAAACCTCCTCTTGTTCCTAGAGCTTTACATCAGAAGCACACTACTACTACAACTACTACTTCATTTACCATGCCATTGCCAAAACCAAGCTTCAAGGAGAAAGCTATAGCTCATCAAATTGACTTCTTACATGCTCCTTTTGGTGGGTCTTCAGTTGTTGGCTAG 1311 0.4317 MACIDNSCAFNHSHRPHRHRATQPAYQAIKKLCTQHGEIRLDHFHLLRLLGCGDIGKVFLCKIKKSLKPQSNCCYAMKLVDRESLRLKNKLKRADMEEQVLSMLDHPFLPTLYAKFDACQYSCLVLDYCPGGDLFTLQQQQPDLHFSISTARFFAAEVLLALEYLHMMGIIYRDLKPENVLIQEDGHIMLIDFDLSLHLEVHPKLLKRGLRHDVMSKRMKKKPMLCCNTSDGMHPQPSEAARGVDIEMSAEPVNGRSHSFVGTHEYLAPEVVLGLGHGSAVDWWGFGVFLYELLFGFTPFKDTRSSEKTMKNIMRKSLAFPRRTNHQSRDRKDCEEIAKAQDLIEKLLVKNPKKRMGYNRGSCEIKKHEFFEGVNWALIRSQKPPLVPRALHQKHTTTTTTTSFTMPLPKPSFKEKAIAHQIDFLHAPFGGSSVVG* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1520 436 SMART serkin_6 44 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev10g1520 436 SUPERFAMILY Protein kinase-like (PK-like) 19 409 IPR011009 -
Aev10g1520 436 PANTHER PROTEIN KINASE PINOID 2 12 400 - -
Aev10g1520 436 Gene3D Transferase(Phosphotransferase) domain 1 245 389 - -
Aev10g1520 436 Gene3D Transferase(Phosphotransferase) domain 1 133 199 - -
Aev10g1520 436 ProSiteProfiles Protein kinase domain profile. 44 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev10g1520 436 Pfam Protein kinase domain 253 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev10g1520 436 Pfam Protein kinase domain 44 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev10g1520 436 PANTHER FLIPPASE KINASE 1-RELATED 12 400 - -
Aev10g1520 436 Gene3D Phosphorylase Kinase; domain 1 42 132 - -
Aev10g1520 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1520 Aev-Chr10 18161927 18165905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1520 9 413 AGC Kinase Gene Family AT2G26700 47.414 8.43e-135 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aev10g1520 Pkinase 2.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1520 K08286 - nnu:104592366 447.203