Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1518 ATGGAAGAGACACAGATGAATTCGAACAAGCCGAGAATGATGGGAATAGGAGCAGCAGCCCCAAATGAAGGTGGAGGAGGAAGAAGCTACTACAAGACTCAGCTCTGCAGGAGGTTCATGGAGGGTACCTGCCCTCATGGATACAAATGCACCTACGCCCATGGCTTCTCTGACCTCAGGCGCACCAACCACCAAGAACCCAAAATCTGCAGAATGTTCTCTCTTCACAAACACTGCACTTATGGCCACAACTGTCGCTTCCTTCATTCATCAGATCATCATCATCATCATCATCAATTCAACAATGCCCTTCTTGATCCTCCTGCCCATCCCCAACCACAACCAGGAGGAGGGAAAAATGAGGGCTCCTCTTCTGCAGGATACAGGGCAATGCAAACTTCTACTGCTGCAAATACCTCAACCAACACCGTGGCAACCAGCTCTTTGCATAAGAATGAAGATCCTTACAGAGTGAAGTTCATCTTCAAGGAAAATAACATGCGAAAAATAAACGGCATCTATGCTGATTGGATTTGA 537 0.4693 MEETQMNSNKPRMMGIGAAAPNEGGGGRSYYKTQLCRRFMEGTCPHGYKCTYAHGFSDLRRTNHQEPKICRMFSLHKHCTYGHNCRFLHSSDHHHHHHQFNNALLDPPAHPQPQPGGGKNEGSSSAGYRAMQTSTAANTSTNTVATSSLHKNEDPYRVKFIFKENNMRKINGIYADWI* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1518 178 Gene3D - 26 104 - -
Aev10g1518 178 PANTHER ZINC FINGER C-X8-C-X5-C-X3-H TYPE FAMILY PROTEIN 27 177 - -
Aev10g1518 178 ProSiteProfiles Zinc finger C3H1-type profile. 30 57 IPR000571 GO:0046872
Aev10g1518 178 MobiDBLite consensus disorder prediction 1 21 - -
Aev10g1518 178 MobiDBLite consensus disorder prediction 98 128 - -
Aev10g1518 178 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 31 56 IPR000571 GO:0046872
Aev10g1518 178 SMART c3hfinal6 30 56 IPR000571 GO:0046872
Aev10g1518 178 SMART c3hfinal6 66 91 IPR000571 GO:0046872
Aev10g1518 178 SUPERFAMILY CCCH zinc finger 29 60 IPR036855 GO:0046872
Aev10g1518 178 ProSiteProfiles Zinc finger C3H1-type profile. 65 92 IPR000571 GO:0046872
Aev10g1518 178 PANTHER CCCH ZINC FINGER/TIS11-RELATED 27 177 IPR045877 GO:0003729
Aev10g1518 178 SUPERFAMILY CCCH zinc finger 64 91 IPR036855 GO:0046872
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1518 32 90 C3H Transcription Factor Family AT1G68200 44.444 1.69e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev10g1518 zf-CCCH 9.3e-08 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1518 K18753 - cam:101493245 136.346