Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1475 ATGGAAGAAGATGATGATTACGTGGAGTACGTACCAGTGGCGAAGCGCAGGGCCATGCAAGCGCACGACATTCTTGACCGAAAAGGTAAGTCCTCTGTTTCTTCTTCGGCCTTCGTTGATGATGATTCGGAGAGAACCAGTGTGCCAGAAGCTAAACCGAGCCTTCTCTTGAAGGCTTCGCAGCTGAAAAAGGAACAGCCCGAGATAAGTGTCACGGAGCAGATTCTTCAACAGGAGAAGGACATGCTCGACAATTTGCCTGACAGAAAAACCCTTTTGTCCGTTCGTGAATTGGCCAAAGGAATCACTTACTCTGAGCCTTTGCCCACTGGATGGAAACCCCCTCTGCATGTGAGAAGGATGCCCAAAAGGGAAACTGATTTGATTAGGAAACAGTGGCACATCCTTGTCGATGGCGAAGAGATCCCTTGCCCAGTTAAGAATTTCAAGGACATGAGGTTCCCTGATCCCATTTTGAACAAGTTGAGAGCTAAGGGGATTGTGCAACCTACTCCAATTCAGGTGCAAGGACTTCCTGTTATTCTATCTGGAAGGGACATGATTGGAATCGCCTTCACTGGCTCAGGGAAGACTCTGGTATTTGTGCTGCCGATGATCATGTTGGCATTGCAGGAGGAGATTATGATGCCTGTTGTCCCTGGAGAAGGCCCTTTTGGCTTGATTGTTTGCCCCTCGAGGGAACTTGCTAGGCAGACTTATGAAGTGGTTGAGCAGTTCTTGAAGCCCTTGTGGGAAGCCGGTTATCCGGAGCTGAGGCCTTTGCTTTGCATTGGTGGGGTGGACATGAGATCACAGGTTGATATTGTGAAGAAGGGTGTTCATATTGTTGTTGCCACTCCTGGGAGGCTGAAGGATATGCTGGCAAAGAAGAAGATGAATCTTGATAGTTGTAGGTATTTGACTTTGGATGAGGCTGATAGGTTGGTGGATTTGGGGTTTGAGGACGATATAAGAGAGGTGTTTGATCACTTCAAAGATCAAAGGCAAACCCTCTTGTTCTCTGCCACTATGCCAACTAAGATTCAGAATTTTGCTAGGAGTGCTTTGGTGAAGCCTGTTATTGTCAATGTTGGAAGGGCAGGGGCAGCAAATCTTGATGTGATTCAGGAGGTAGAGTATGTCAAGCAAGAGGCCAAAATAGTGTATCTCCTTGAGTGCCTTCAGAAAACACCACCTCCTGTCTTGGTGTTCTGTGAAAACAAGGCTGATGTGGATGATATTCATGATTATCTTCTCATGAAAGGAGTGGAAGCAGTGGCCGTTCATGGAGGCAAGGATCAGGAAGAGCGAGAGTATGCCGTTGCGTCCTTTAAATCCGGGAAGAAGGATGTGTTGGTTGCAACTGATGTTGCATCCAAGGGTTTGGATTTCCCTGATATTCAGCATGTTATCAACTATGACATGCCGACTGAGATCGAAAATTATGTGCACAGGATTGGAAGGACTGGAAGGTGTGGCAAGACTGGCATAGCCACAACTTTTATAAACAAGAATCAAAGTGAGACAACACTTCTTGATCTGAAACACCTCTTGCAAGAAGCTAAACAGAGGATTCCTCCGGTTCTGGCTGATTTGAATGAGCCAATGGAAGACAACGATGGAATTATTGACAAAAGTGGTGTCAAGGGATGTGCATATTGTGGGGGGCTTGGTCATCGCATCCGGGATTGTCCGAAATTTGAACATCAGAAGAGCATGGCAATTGCTAATAGCAGAATGGATTACTTTGGATCTGGTGGTTACAAGGGAGAAATTTGA 1779 0.4632 MEEDDDYVEYVPVAKRRAMQAHDILDRKGKSSVSSSAFVDDDSERTSVPEAKPSLLLKASQLKKEQPEISVTEQILQQEKDMLDNLPDRKTLLSVRELAKGITYSEPLPTGWKPPLHVRRMPKRETDLIRKQWHILVDGEEIPCPVKNFKDMRFPDPILNKLRAKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMLALQEEIMMPVVPGEGPFGLIVCPSRELARQTYEVVEQFLKPLWEAGYPELRPLLCIGGVDMRSQVDIVKKGVHIVVATPGRLKDMLAKKKMNLDSCRYLTLDEADRLVDLGFEDDIREVFDHFKDQRQTLLFSATMPTKIQNFARSALVKPVIVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLVFCENKADVDDIHDYLLMKGVEAVAVHGGKDQEEREYAVASFKSGKKDVLVATDVASKGLDFPDIQHVINYDMPTEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLADLNEPMEDNDGIIDKSGVKGCAYCGGLGHRIRDCPKFEHQKSMAIANSRMDYFGSGGYKGEI* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1475 592 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 373 533 IPR001650 -
Aev10g1475 592 MobiDBLite consensus disorder prediction 25 49 - -
Aev10g1475 592 PANTHER BNAA06G38640D PROTEIN 8 572 - -
Aev10g1475 592 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 178 362 IPR014001 -
Aev10g1475 592 Coils Coil 504 524 - -
Aev10g1475 592 Pfam DEAD/DEAH box helicase 171 350 IPR011545 GO:0003676|GO:0005524
Aev10g1475 592 SMART helicmild6 412 493 IPR001650 -
Aev10g1475 592 CDD SF2_C_DEAD 374 502 - -
Aev10g1475 592 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 147 175 IPR014014 GO:0003724
Aev10g1475 592 Gene3D - 115 366 IPR027417 -
Aev10g1475 592 SMART ultradead3 166 377 IPR014001 -
Aev10g1475 592 Pfam Helicase conserved C-terminal domain 386 493 IPR001650 -
Aev10g1475 592 Pfam Zinc knuckle 550 566 IPR001878 GO:0003676|GO:0008270
Aev10g1475 592 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 223 508 IPR027417 -
Aev10g1475 592 Gene3D - 372 534 IPR027417 -
Aev10g1475 592 SUPERFAMILY Retrovirus zinc finger-like domains 550 571 IPR036875 GO:0003676|GO:0008270
Aev10g1475 592 ProSiteProfiles Zinc finger CCHC-type profile. 551 566 IPR001878 GO:0003676|GO:0008270
Aev10g1475 592 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 8 572 - -
Aev10g1475 592 CDD DEADc_DDX41 158 363 IPR044113 GO:0000398|GO:0003724|GO:0005524
Aev10g1475 592 SMART c2hcfinal6 550 566 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1475 Aev-Chr10 17933007 17934785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1475 148 532 Eukaryotic Initiation Factors Gene Family AT1G72730 30.928 1.32e-57 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1475 K13116 - gmx:100819984 1056.97