Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1465 ATGGAGCACTCCTGGGAGAACTGGTCTCTAATTCACTCGGAAATGGGGCATGAAGAAGGTGATGATTTCCTGGAGCAGTGCCACACTACTGATGATGACGATTTCCTCAGAGACATACTGCAGCAACCAGATTTCTCTTCTGAAAGTGAGACCCAATCTTTTCCTCCTCCTCCTCCTCCCATTGTTGCCCACAACAACAACTTCTTCGCCGCCTCACTTGCCGCCACAGACGGCAGCAGCATATCCTCCGGTGAGATCAGAGATAAGCCCGCAGCAGGGAAGAAGAGTAATAACAGGCCTCATCATCGCCCTTCCTCTTCTTCCAAACCGCCAAGGACATTCATTCTGTCTTTCGATAGCTCCACCATAATACCCGCAGAAACAGCAGAACAATCTCCTCCTCTTGGTGGCTTTCATCAATTGGGAGCAGCAGCAACAACGCGTTCTTCTAAATCTAGTTCTTCCTCCCCTGCTTTCTCCTCAAAGAAACGGGCCCTGGAAAGTAATAACAATAATGATCAGAACTCGGAACCAAAACCCACTAGCCATAGCCAAGGAGGGAATAAGAAGAGTAGGAACGACTCTCAGACTCTGGATCACATAATGGCAGAGAGGAAAAGGAGACAAGAACTCACTGAAAGGTTCATAGCACTCTCTGCCACTATTCCTGGCTTGAAAAAGACGGACAAGGCATCAATACTTCGGGAAGCAATAAACTATGTGAAAGAACTGAAAGAAAGGGTGACAGAGCTAGAAAAGCGAAAGAATAAGAGAGGGGGAGATGAGGAGTCAAGGATGATGATATTGGTGAAGAAGAACGGTAGCGACAGAGGTGGTGGAGGAAACAACGAAGATACGATATCGAGTGGAACAACAAGTCCTGAGAATGATGATGATGATAGGGAATTGTTGCTGCCTGACGTTGAAGCGAGAGTGTTGGAGAAGGAGGTTCTCATTGAGATCCACTGCGAGAAAGCCAACGGCGTTGGGCTCAAAATATTGGACCACCTTCAAAATCTCAACCTCACTGTCACCGCCAGCAGCCTCTTGCCTTTCGGCAATTCCACTCTTGGTATTACTATTATCGCTCAGATGGGTGAGGCATACAGGATGACAGTGAATGATCTAGTGACGAACTTGCGGGAAGTGCTGCTGAATCACGTTACTACAGATCCGTACTAG 1182 0.4755 MEHSWENWSLIHSEMGHEEGDDFLEQCHTTDDDDFLRDILQQPDFSSESETQSFPPPPPPIVAHNNNFFAASLAATDGSSISSGEIRDKPAAGKKSNNRPHHRPSSSSKPPRTFILSFDSSTIIPAETAEQSPPLGGFHQLGAAATTRSSKSSSSSPAFSSKKRALESNNNNDQNSEPKPTSHSQGGNKKSRNDSQTLDHIMAERKRRQELTERFIALSATIPGLKKTDKASILREAINYVKELKERVTELEKRKNKRGGDEESRMMILVKKNGSDRGGGGNNEDTISSGTTSPENDDDDRELLLPDVEARVLEKEVLIEIHCEKANGVGLKILDHLQNLNLTVTASSLLPFGNSTLGITIIAQMGEAYRMTVNDLVTNLREVLLNHVTTDPY* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1465 393 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 195 256 IPR036638 GO:0046983
Aev10g1465 393 Coils Coil 234 254 - -
Aev10g1465 393 MobiDBLite consensus disorder prediction 279 293 - -
Aev10g1465 393 MobiDBLite consensus disorder prediction 77 114 - -
Aev10g1465 393 SMART finulus 201 250 IPR011598 GO:0046983
Aev10g1465 393 PANTHER BHLH TRANSCRIPTION FACTOR 63 388 - -
Aev10g1465 393 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 52 - -
Aev10g1465 393 Pfam Helix-loop-helix DNA-binding domain 200 244 IPR011598 GO:0046983
Aev10g1465 393 MobiDBLite consensus disorder prediction 128 197 - -
Aev10g1465 393 MobiDBLite consensus disorder prediction 143 192 - -
Aev10g1465 393 PANTHER BHLH TRANSCRIPTION FACTOR 1 52 - -
Aev10g1465 393 Gene3D - 193 264 IPR036638 GO:0046983
Aev10g1465 393 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 63 388 - -
Aev10g1465 393 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 195 244 IPR011598 GO:0046983
Aev10g1465 393 MobiDBLite consensus disorder prediction 271 301 - -
Aev10g1465 393 MobiDBLite consensus disorder prediction 40 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1465 Aev-Chr10 17863329 17867293 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1465 191 388 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 44.444 3.54e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev10g1465 HLH 1.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1465 - - aprc:113856039 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1465 10 17863329 17867293 Aev09g0111 09 944551 948332 PCT
Aev09g0112 09 956343 960600 Aev10g1465 10 17863329 17867293 PCT