Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1464 ATGAGTTTTGTTTCTTCAAACCCGATCGAGTTAGGACTTTTACCCAGGCTCCACTTGATCCATATCTTCTTCATTTCTTGCCCCAACAAGGATATGATGGAGATACCGTGGCACAACCTCTTCTCAGACATGGAAATGGAAATGGAAGGTGAGGGTGAATTGTTGAAGGAGCAGAGGTACAACAAGGTGAACTCATTCGATCAGGAGGATGATGAAGAACTGGATCTTGGAGATATCCTGCAGCTACACTACTCTGCTAATAATAACTTCTCCTTTGACAGCACCGAAACTCTCTCTCCCTCTGCCATCGGTGCCACCAGCAGCAGCACTTTATCCTTTGACGACACTACTGGTGCTGCCGGCGGAGGATTCAACAACGACGACGACACCAACAACAATAAGCGATGCAAAATCCTTAGCAAGAGCAGCAGCTCCAACTCCATCGCCTCCCAACTCGTTCCTCCTCCTCCTCTTGCTGCTGAGACTAATTCTTCTTCTTCCCCCAAATCCTGCATTATTCTGTCTTTCGATGATTCCTCAGGGAGCCGCGAAGGTGGTGGTGGTGGGCGGAAGAAGCAGCAGCAGGGTGGAGGAGGCAGCAGCAGCAGCAGGGGACTACGTTGTTCTACCAATTCCTGCAACCAGAAGAAGGAGCTGAGTGCTGCAAAGAAGACGAGAAACTCTTCCGAGTCATTAGACCACATCATGGCAGAGAGGAAGCGCAGGCAGGAACTAACCGAGAGATTCATAGCACTTTCCGCCACTATTCCTGGCTTGAAGAAGATTGACAAGGCGTCAATACTAAGTGAAGCAATCAATTACGTGAAACAACTTCAAGAACGGGTCAAAACGTTGGAGAATGAAAGTAGCAACAAGGTCAAAGTGGAGTCCTTCATGATGAGTAGGGGCACCGAGGAAGGCACTGATGGCTCTAGCAAAATTACCAACAGCAGTGGCAGCAGCTCTGATCATGAGTACTACTGCCATAGACCAAAACTCAATAATAGTAATATTGTCGATTGGCTCCCTGAAGTTGAAGCAAGAGCATTGGAAAACCAAGTGCTGCTCCGAATCCATTGCCACAACCACAGTGGCGTTATGCTCAACATACTCGCCCATCTTAAAGCTCTTCATCTATCCGTAATAAGCAGTAGCGTCTTGCCATTTGGGAATTCCGCACTTGACATTACCATTATTGCTCAGATGGGAGAGAAATACAAGGGAACGGTGAAGGAACTAGTTAAAAGCATGAGAATGAGTCTCTTGGTGGAGTCACCTGATGACATACAACAACGTAACAGGGATCCATGA 1311 0.4744 MSFVSSNPIELGLLPRLHLIHIFFISCPNKDMMEIPWHNLFSDMEMEMEGEGELLKEQRYNKVNSFDQEDDEELDLGDILQLHYSANNNFSFDSTETLSPSAIGATSSSTLSFDDTTGAAGGGFNNDDDTNNNKRCKILSKSSSSNSIASQLVPPPPLAAETNSSSSPKSCIILSFDDSSGSREGGGGGRKKQQQGGGGSSSSRGLRCSTNSCNQKKELSAAKKTRNSSESLDHIMAERKRRQELTERFIALSATIPGLKKIDKASILSEAINYVKQLQERVKTLENESSNKVKVESFMMSRGTEEGTDGSSKITNSSGSSSDHEYYCHRPKLNNSNIVDWLPEVEARALENQVLLRIHCHNHSGVMLNILAHLKALHLSVISSSVLPFGNSALDITIIAQMGEKYKGTVKELVKSMRMSLLVESPDDIQQRNRDP* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1464 436 MobiDBLite consensus disorder prediction 301 323 - -
Aev10g1464 436 Pfam Helix-loop-helix DNA-binding domain 234 279 IPR011598 GO:0046983
Aev10g1464 436 MobiDBLite consensus disorder prediction 304 323 - -
Aev10g1464 436 SMART finulus 235 284 IPR011598 GO:0046983
Aev10g1464 436 MobiDBLite consensus disorder prediction 194 218 - -
Aev10g1464 436 Gene3D - 228 298 IPR036638 GO:0046983
Aev10g1464 436 PANTHER BHLH TRANSCRIPTION FACTOR 40 421 - -
Aev10g1464 436 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 233 290 IPR036638 GO:0046983
Aev10g1464 436 MobiDBLite consensus disorder prediction 145 232 - -
Aev10g1464 436 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 229 278 IPR011598 GO:0046983
Aev10g1464 436 Coils Coil 268 295 - -
Aev10g1464 436 MobiDBLite consensus disorder prediction 145 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1464 Aev-Chr10 17848355 17850321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1464 233 421 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 41.579 1.29e-37 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev10g1464 HLH 7.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1464 - - lang:109357653 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1464 10 17848355 17850321 Aev09g0110 09 933810 938410 PCT
Aev09g0111 09 944551 948332 Aev10g1464 10 17848355 17850321 PCT