Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1456 ATGGAAAACTCAAAGTCTCAAACAAACATAAGGAGTTGCCACGAGAACAGAGAACAGGAGGAGGAGTTGCGGCGAAAACAGAACAACAACAGCAGCACGAAGACAAGAATATGGGTAGGAACGTTTGAAACAGCAGAGGATGCAGCAAGAGCATATGACGAAGCAGCGAGGCTCATGTGTGGCCCAACAGCACGCACCAACTTCACCTATCATCATCATCATGACCACCCACACTTCTCTTCTTCTTCTTCATCAAAGCTTCTCCTCTCTCCAACTTTGACTGCCAAGCTACACAAGTGTCACATGGCTTCCCTCTCCCTTCAAATGCCCAACCACAAACAACCTCCACACAAAGTAGCAGCAGCAGGGCCAGCTGGGGGGACTCATAATCACAGCCATGCCATTCCTCATGCTGCCGGGGCTGGCGGTTTTGTCGAAGCGGCGGCAGAGCATGGATTTCCTGATCATCATCAGCCGCCTGCTGCTGTTCTTGAAGATTATGATCAAATTCACATAGAGCAGATGATACAGGAGTTACTTCATTATGGCTCTATTGAGCTTGCCTCTTCTTAA 573 0.4869 MENSKSQTNIRSCHENREQEEELRRKQNNNSSTKTRIWVGTFETAEDAARAYDEAARLMCGPTARTNFTYHHHHDHPHFSSSSSSKLLLSPTLTAKLHKCHMASLSLQMPNHKQPPHKVAAAGPAGGTHNHSHAIPHAAGAGGFVEAAAEHGFPDHHQPPAAVLEDYDQIHIEQMIQELLHYGSIELASS* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1456 190 MobiDBLite consensus disorder prediction 11 29 - -
Aev10g1456 190 MobiDBLite consensus disorder prediction 1 30 - -
Aev10g1456 190 MobiDBLite consensus disorder prediction 111 131 - -
Aev10g1456 190 Pfam AP2 domain 29 61 IPR001471 GO:0003700|GO:0006355
Aev10g1456 190 ProSiteProfiles AP2/ERF domain profile. 6 69 IPR001471 GO:0003700|GO:0006355
Aev10g1456 190 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 33 188 - -
Aev10g1456 190 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 33 188 - -
Aev10g1456 190 SUPERFAMILY DNA-binding domain 31 70 IPR016177 GO:0003677
Aev10g1456 190 CDD AP2 30 68 IPR001471 GO:0003700|GO:0006355
Aev10g1456 190 Coils Coil 16 36 - -
Aev10g1456 190 Gene3D AP2/ERF domain 10 70 IPR036955 GO:0003700|GO:0006355
Aev10g1456 190 SMART rav1_2 24 75 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1456 Aev-Chr10 17812039 17814590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1456 34 189 AP2-EREBP Transcription Factor Family AT5G25190 54.717 1.04e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev10g1456 AP2 4.7e-07 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1456 - - adu:107463739 119.398