Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1454 ATGGACCTACAAAACTCTGCAGAGCCATGTCCACCTGAAAATGATTTGATTCCATTATTGGATCTAAGTCTCTCTGGTAAATTAGATTCTTCATCATCAGAAGCAGGAGGAGGGTTGAATCTCATCAAGCGCCTCCAAACAAATTCTTCATTATCCAACAACTCGTCAGAATGCAGTGAATTAGGGAATGAGGTAGAGCCGCGGATGTTCTCATGCAACTACTGCCAGAGAAAGTTTTATAGCTCTCAGGCACTTGGTGGACACCAGAATGCACATAAGCGTGAGAGAACTCTGGCAAAAAGAGGACACAGAGCTTCTGCTGCTGCTGCTGCTGCTGTGAGCATGGCTTCTCTGCCTCTGCATGGCTCATATAGCAGCAGATCATCATCACTTGGAATTCAGGTGCATTCTATGATTAACAAACCATCTTATCAAACACCCTTTTTTGGTCTGTCACGTTATTACCATTTGTGGCAGAGGCACCCTATTATTGACTCACAACCTCCTCCCATTGGGATCGGGAAGCTAAAGCTACTGCCTCATCATAAGGAATTCAGAGGTTTCTGCTTGGGTGGTGGTGGCAGTAATGCCAGTGGCATTAGTAGTGTTCCCCATTTGAAGACTAAACAAGATCAGGAGCTGCACAACCTTGACTTGTCCCTTAAACTCTAA 672 0.4494 MDLQNSAEPCPPENDLIPLLDLSLSGKLDSSSSEAGGGLNLIKRLQTNSSLSNNSSECSELGNEVEPRMFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGHRASAAAAAAVSMASLPLHGSYSSRSSSLGIQVHSMINKPSYQTPFFGLSRYYHLWQRHPIIDSQPPPIGIGKLKLLPHHKEFRGFCLGGGGSNASGISSVPHLKTKQDQELHNLDLSLKL* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1454 223 ProSitePatterns Zinc finger C2H2 type domain signature. 72 92 IPR013087 -
Aev10g1454 223 SUPERFAMILY beta-beta-alpha zinc fingers 67 97 IPR036236 -
Aev10g1454 223 Gene3D Classic Zinc Finger 46 117 - -
Aev10g1454 223 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 16 223 - -
Aev10g1454 223 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 16 223 IPR044246 GO:0009788
Aev10g1454 223 ProSiteProfiles Zinc finger C2H2 type domain profile. 70 97 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1454 Aev-Chr10 17799177 17799848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1454 21 223 C2H2 Transcription Factor Family AT1G80730 42.667 5.68e-35 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev10g1454 None None None