Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1443 ATGATTGTCGTGCTTGGAATTCAGCACAAGATTATTAGACGACGAGTTCAGAGATCAGATGTGCAGATAACCCTTCCAGAGAAATTCGTCCTGGATATTGTACCAGCTATTGGAGCATGCCTTTCAGTCTTGGACATAATTTTTCTGTGGAAGAAAGAACTTAATAGAACCTTTGTTGGATATCACAAGTGGTTTTATAGCTGTTCTGAGCTGATTGTGTGGACAAATGTCATTCTCTTCTCAAAGTGTGCTAGCAACTATTCCATAGTCTTGAACTGCATCTTGTGCTTCTGGTGGATTCTGAAATCGATGTTGGATGTCTTCTATTTTTTGACTATATTTCCATCATTGAAGGTTGCAACATGTATCATAGAAAGCTTAGTTGTTCTCCTGAATATCACATTTGGCATAGCTATCAATTTGGTTAGGGTAAAGAGAGTATCTTCCAAAAGCAGTTTGTTGGGAGATCCACTTCTTTCCCATGATGCGGACCTTGAGGAGGCTGGCCATTGTGACTTTGGAAATAATGTCAACTTTTGGGATTTGATGACTTTCAAATTCATAACACCAGTGATGAATCATGGGGTGGTAAAGCAATTAGACTCTGAAGATCTGCTTCAGCTACCTACTGATATGGATCCTTCTTCCTGTCATGATATAATTTTATCCTGCTGGCGAGCTCAACTGACTAATGATGGTTCAAACCCATCCTTGTTTAGAGCACTCTGTAGTGCATATGGATGGCCATATCTCCGCCTGGGTTTTTTGAAGGTGATTAATGATTGTATTGGTTTTGCGGGACCATTGCTTCTCAATAAGCTGATCCAGTTTCTTCAACAAGGTTCAGTGAATTCAGATGGTTATTTACTTGCAATATCCTTGGGTCTCACCTCTATAATTAAATCCTTTTTAGATACACAATATACTTTTCACCTTTCCAAACTGAAGCTAAGGCTGCGATCTAGCATCATGACTCTAATCTATGAGAAGTGTTTATGCGTGAACCTAGCAGAGCGTTCAAAATTTACAAACGGAGAAATTCAGACATTTATGTCAGTAGATGCTGACCGGACTGTCAACTTGTGTAATAGTTTCCATGATACATGGAGCTTGCCTTTACAAATTGGAGTGGCACTTTATCTTTTGTATACTCAAGTCAAATTTGCATTTGTATCTGGATTAGCTATAACCATTTTATTGATACCAGTGAATAAGTGGATATCAAAATTAATTGCAAGAGCCACTGAACAAATGATGAAGGAGAAGGATGAAAGGATTCGTAGGACAGGAGAACTTTTGACTTATATTCGCACTTTGAAGATGTATGGATGGGAACTTATTTTTTCTAGTTGGTTGATGGAGACGAGATCCTCAGAAGTAAAACACTTAGCTACTCGGAAGTACCTGGATGCTTGGTGTGTATTTTTTTGGGCTACTACCCCAACACTCTTTTCTCTTTCCACATTTGGACTCTTTGCATTGATGGGACATCAACTTGATGCTGCAATGGTTTTCACTTGTCTTGCTTTGTTTAACACACTGATTTCACCTCTGAATTCATTCCCTTGGGTGATCAATGGATTGATTGACGCCATTATATCCTCTAGACGGCTAAGTAGATTTCTCTCTTGTCCTGAATATAGAACCAAAGTGGGAGAGACCAGTTCCTGCTCATCCTCATTCCTGAGTAAACAACCTGATTCTCTACACAGCTTGGCTGTCTTTGTCCAAGACGCATCTTGTACTTGGTCAAGCAGCGATGAACAACCATTAAATTTGGTGTTGAATCATGTGACCCTAAGCCTGGCCAAGGGTTCCTTTGTTGCTGTTATTGGAGAGGTTGGTTCAGGTAAATCATCCCTGCTGTATTCAGTTCTTGGAGAAATGCGGCTTGCTCATGGATCTATTTATTCTGATGGATGTGTAGCGTATGTACCACAGGTCCCGTGGATTTTATCTGGCACTGTACGTGACAACATATTATTTGGGAAAAGCTATGATCCTGTAAGGTATACAGATACACTGCATGCATGTGCATTAGATGTTGATATCTCATTGATGGTTGGAGGTGACATGGCTTATATTGGAGAGAAAGGAGTAAACTTATCTGGTGGGCAGAGAGCTCGTCTTGCTTTGGCAAGGGCAGTGTATCATGACTCAGATGTTATTATGCTCGATGATGTCCTGAGTGCAGTTGATGTACAAGTTGCTCAGTGGATCATACACAATGCCATTCTAGGTCATCTAATGCATGGAAAAACTCGATTGCTCTGTACCCACAACACGCAGGCAATATCTTCAGCTGACATGATTGTTGTAATGGACAAGGGACGTGTAAAGTGGTCAGGAAGTTCAGCTGACTTTCCATTATCTTCATATACAACGTTCTCCCCATTGAATGAAATTGATTCAGCGTTAATGGATCGCAAACAATCTCCCGGCACAGATTCTTTGTCCAAATCCAAGGAGGAGTCTCTTCCTGACAAAGTAGCTATGCATGATCTGGAGGGAGCAGAGGAGATAATTGAAGTTGAGTTCAGGAAAGAGGGCAAAGTTGAAATTGGAGTGTATAAGAACTATGCTGTCTTCATTGGCTGGTTCATGACAGTTGTTATATGCTTGTCAGCTATTCTAATGCAAGCTTCACGTAATGGGAATGATTTATGGCTATCATATTGGGTTGATACAACAACAGAAACCGGTCAAACAAAGTACTCTTTGTCCTTCTATCTGGCTATACTATGTCTCTTTTGTATTGCGAACTCCTTCTTCACATTGGTGAGGGCATTCTCTTTTGCATTTGGTGGCTTACAAGCAGCAACTAAGGTACACAATAGATTGCTAAGCAAACTTATCAATGCACCTGTGCAATTCTTTGATCAGACCCCAGGTGGAAGAATACTGAACAGGTTTTCTTCAGATCTTTATACAATTGATGATTCCCTTCCATTCATCATGAACATTCTCCTAGCTAATTTTGTTGGCCTGTTGGGTATTGCAATAATTTTGTCATATGTACAGGTCTTCTTCCTAGTCTTGCTATTGCCATTCTGGTATATCTACAGTAGACTCCAGTTCTTCTACAGGTCAACATCAAGAGAATTACGCCGATTGGATAGTGTTTCTCGTTCTCCAATATATACATCTTTCTCTGAAACACTTGATGGATCTTCAACTATCAGGGCATTTAAATCAGAGGACTTTTTCTTTGCCAAATTCATCGAAAACATCACACTGTATCAGAAGACTTCCTACACTGAGATAGTAGCAAGTTTATGGCTTTCCTTGCGCCTTCAGTTATTAGCTGCATTTATTATCTCATTCATAGCTCTGATGGCTGTTGTTGGATCTCATAGCAGTCTGCCTATCAACTTCGGTACCCCGGGACTGGTAGGATTGGCCCTCTCATATGCAGCTCCTATCGTATCCTTGTTGGGGAGTTTTTTAACCAGTTTTACTGAAACAGAAAAGGAAATGGTTTCAGTTGAAAGAGCCCTTCAATACATGGAAATTCCTCAAGAAGAACAAGCTGGATGTCTATACGTGAATCCAGATTGGCCAAATCAAGGAATTATTGAATTCCAGAATGTCACTTTGAAATATAAGCCAACTTTGCCAGCTGCACTTTGCAATCTTAGTTTTACAATTGCAGGTGGAACACAGGTTGGAATAATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTACTAAATGCCCTTTTCCGCCTTACCCCATTATGTTCAGGCTCCATCTCAATTGACGCCATGGACATTAAAAAAATTCCTGTCAGAGAACTACGTGTGCATTTGGCTATTGTTCCTCAGAGTCCGTTTTTGTTTGAAGGATCATTAAGGGATAACCTTGATCCACTCAAAATGAGTGATGACATCAAAATCTGGAATGCTTTGGAGAAGTGCCATGTGAAAGAGGAAGTGGAAGCAGCTGGAGGGCTGGATATTCTCGTTAAGGAATCTGGGGTATCATTTTCTGTTGGCCAGCGCCAGCTTCTTTGCCTTGCACGCGCACTTCTTAAATCTTCAAAGGTTCTCTGTTTGGATGAATGCACCGCCAATGTAGACATTCAAACTGCTTCACTGCTGCAAAGTACCATATCAAGTGAATGCCAAGGCATGACAGTGATCACAATTGCTCACCGGATATCAACTGTTTTAAATATGGATGACATTCTGATTCTAGAGCACGGGAACCTGGCTGAACAAGGAAATCCGCAGGTTCTGCTGAAAGATGACCCCTCTATATTTTCCAGTTTTGTTAAAGCTTCAGCAATGTAA 4290 0.4063 MIVVLGIQHKIIRRRVQRSDVQITLPEKFVLDIVPAIGACLSVLDIIFLWKKELNRTFVGYHKWFYSCSELIVWTNVILFSKCASNYSIVLNCILCFWWILKSMLDVFYFLTIFPSLKVATCIIESLVVLLNITFGIAINLVRVKRVSSKSSLLGDPLLSHDADLEEAGHCDFGNNVNFWDLMTFKFITPVMNHGVVKQLDSEDLLQLPTDMDPSSCHDIILSCWRAQLTNDGSNPSLFRALCSAYGWPYLRLGFLKVINDCIGFAGPLLLNKLIQFLQQGSVNSDGYLLAISLGLTSIIKSFLDTQYTFHLSKLKLRLRSSIMTLIYEKCLCVNLAERSKFTNGEIQTFMSVDADRTVNLCNSFHDTWSLPLQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWISKLIARATEQMMKEKDERIRRTGELLTYIRTLKMYGWELIFSSWLMETRSSEVKHLATRKYLDAWCVFFWATTPTLFSLSTFGLFALMGHQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAIISSRRLSRFLSCPEYRTKVGETSSCSSSFLSKQPDSLHSLAVFVQDASCTWSSSDEQPLNLVLNHVTLSLAKGSFVAVIGEVGSGKSSLLYSVLGEMRLAHGSIYSDGCVAYVPQVPWILSGTVRDNILFGKSYDPVRYTDTLHACALDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHDSDVIMLDDVLSAVDVQVAQWIIHNAILGHLMHGKTRLLCTHNTQAISSADMIVVMDKGRVKWSGSSADFPLSSYTTFSPLNEIDSALMDRKQSPGTDSLSKSKEESLPDKVAMHDLEGAEEIIEVEFRKEGKVEIGVYKNYAVFIGWFMTVVICLSAILMQASRNGNDLWLSYWVDTTTETGQTKYSLSFYLAILCLFCIANSFFTLVRAFSFAFGGLQAATKVHNRLLSKLINAPVQFFDQTPGGRILNRFSSDLYTIDDSLPFIMNILLANFVGLLGIAIILSYVQVFFLVLLLPFWYIYSRLQFFYRSTSRELRRLDSVSRSPIYTSFSETLDGSSTIRAFKSEDFFFAKFIENITLYQKTSYTEIVASLWLSLRLQLLAAFIISFIALMAVVGSHSSLPINFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVSVERALQYMEIPQEEQAGCLYVNPDWPNQGIIEFQNVTLKYKPTLPAALCNLSFTIAGGTQVGIIGRTGAGKSSVLNALFRLTPLCSGSISIDAMDIKKIPVRELRVHLAIVPQSPFLFEGSLRDNLDPLKMSDDIKIWNALEKCHVKEEVEAAGGLDILVKESGVSFSVGQRQLLCLARALLKSSKVLCLDECTANVDIQTASLLQSTISSECQGMTVITIAHRISTVLNMDDILILEHGNLAEQGNPQVLLKDDPSIFSSFVKASAM* 1430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1443 1429 Pfam ABC transporter 1210 1356 IPR003439 GO:0005524
Aev10g1443 1429 Gene3D - 1178 1426 IPR027417 -
Aev10g1443 1429 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 574 801 IPR003439 GO:0005524
Aev10g1443 1429 ProSitePatterns ABC transporters family signature. 702 716 IPR017871 GO:0005524
Aev10g1443 1429 ProSitePatterns ABC transporters family signature. 1328 1342 IPR017871 GO:0005524
Aev10g1443 1429 Gene3D - 554 803 IPR027417 -
Aev10g1443 1429 PANTHER MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 7 202 1409 - -
Aev10g1443 1429 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 870 1157 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev10g1443 1429 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 202 1409 - -
Aev10g1443 1429 Pfam ABC transporter 595 727 IPR003439 GO:0005524
Aev10g1443 1429 CDD ABC_6TM_MRP7_D1_like 253 538 - -
Aev10g1443 1429 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1192 1425 IPR003439 GO:0005524
Aev10g1443 1429 SMART AAA_5 1218 1402 IPR003593 -
Aev10g1443 1429 SMART AAA_5 604 778 IPR003593 -
Aev10g1443 1429 Pfam ABC transporter transmembrane region 871 1124 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev10g1443 1429 Pfam ABC transporter transmembrane region 254 518 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev10g1443 1429 SUPERFAMILY ABC transporter transmembrane region 866 1174 IPR036640 GO:0005524|GO:0016021
Aev10g1443 1429 CDD ABCC_MRP_domain1 576 778 - -
Aev10g1443 1429 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 255 530 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev10g1443 1429 SUPERFAMILY ABC transporter transmembrane region 241 546 IPR036640 GO:0005524|GO:0016021
Aev10g1443 1429 CDD ABCC_MRP_domain2 1190 1409 - -
Aev10g1443 1429 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 576 787 IPR027417 -
Aev10g1443 1429 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1186 1417 IPR027417 -
Aev10g1443 1429 Gene3D ABC transporter type 1, transmembrane domain 239 546 IPR036640 GO:0005524|GO:0016021
Aev10g1443 1429 Gene3D ABC transporter type 1, transmembrane domain 838 1176 IPR036640 GO:0005524|GO:0016021
Aev10g1443 1429 CDD ABC_6TM_MRP7_D2_like 869 1169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1443 Aev-Chr10 17716308 17727352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1443 589 784 Calmodulin-binding Proteins AT2G36910 27.477 5.24e-19 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1443 K05674 - gmx:100814181 2404.02