Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1438 ATGGCAGATCTCAAGGAACGGCTACTCCCACCCAAACCAGCGTCAGCTTTTAACGTTAGAGAGCCTGTGAATCGACCATCTGCCTCTGGAAGGCAAACTTTTCAAGGAGTTGATGTTCTTGGGCTAAAGAAGCGAGGCCAAGGTCTCCGATCATGGATTCGTGTTGACACATCTGGAAATTCCCAGGCCATCGAGGTAGACAAGTTTACAATGATGCGACGTTGTGATCTACCTGCACGGGATCTTCGCCTACTAGATCCTCTGTTTGTCTACCCATCAACAATCCTTGGTAGAGAAAAGGCTATTGTTGTAAATCTAGAGCAGATACGGTGTATTATTACAGCAGACGAGGTTCTTCTCTTGAATTCTCTTGATAGTTATGTACTGCACTATGTGATGGAGCTACAAAGGCGGTTGACGTCAACTGGGGTTGGTGAGGTGTGGCAGTCAGACAGTTCTGACATGAACCGAAGGAGAGGAAGTAGAAATTTTGAAAATGTCTATAGCAACACTTCCCCTGATTATTTACCTTTTGAGTTCAGGGCTCTTGAAGTTGCCTTGGAAGCAGCTTGTACATTTCTTGACTCTCAGGCAGCAGAGTTAGAAATTGAGGCTTATCCATTGTTGGATGAATTAACATCAAAAATCAGCACTCTGAATTTAGAACGTGTTCGTCGGTTGAAAAGTAGACTTGTTGCCCTGACTAGGAGGGTTCAAAAGGTTAGAGATGAAATAGAGCAGCTTATGGATGATGATGGTGATATGGCTGAAATGTATCTTACTGAAAAGAAAAGACGGATGGAGTTATCATTTTGTGGAGATCAGTCTGTGATGGGATATAGATCTGTTGATGGTGCATCTATTTCTGCCCCAGTCTCTCCCGTTGCATCACCTCCTGATTCTCGGAGGCTTGAAAAGAGTTTGAGCATTGCTCGGAGTCGATACGAGAGCACAAGGAGTACTGAAAGTTCAACGGAAAGTATAGAAGAGCTTGAGATGTTGCTAGAAGCATACTTTGTTGTCATTGACAGCACTCTGAACAAGTTGACATCATTGAAAGAGTACATTGATGATACTGAAGATTTCATTAACATTCAACTGGATAATGTGCGTAATCAGCTTATCCAGTTCGAGCTTTTACTCACGACCGCGACGTTTGTGGTTGCCATCTTTGGGGTGGTAGCAGGAATATTTGGGATGAATTTTGAAATCTCGTTATTTAATGTGCCCTCTGCATTCCAATGGGTCCTTATAATTACGGGACAATGTCTGTATATTAAGATCATCAAAGGAGTTCTGCTACATCCATGTCATGCCATGGACTTACCACATGAGGAAAGAGGTGTGCGTCTAAAACGTCCCCAACTAATTGGAAGTGCGAACAATGTCTTTCTTGTTCTCTTTCACGCATTCCATCAAACAGCTTCATTACCCTCCCAAACTCATCCTTCCGCGCCCTTCAACTTCCACTTCGATGACCCTCCTCCGCCGAGGCAATTCCTCGAATTGCTCAAAAGAGCCGCTAATTTCTCGTCGCAAGCGGAGGCAGCCACCCATCTCGACCACTCAGGCTTGGAAGCAAATAGGGATTTGATATGTTCTGCAATTTGGGCGTTGAGGGAAGAATGGCAGCCTGCACTTGTTGCCTTCAAATGGGGCGGCAAATTTCATTGCTTTGATGAGAAAGCTTGTAACTTGATGATATGGGTTCTTGGAACTCATGGAAAGTTTTCCACTGCGTGGTGTATCATTCGTGACATGCATTGCTCTTCTCTCTCCACACGTAGTGCTATGCTTATTATGATTGATAGATATGCAGCCGCTAATAACTCAGAGAAGGCCATTCAAACATTCAACTTTATGGAGAAATTCAGATTGACTCCTGATCAGGAAGCATACCATGCACTTTTGAATGCTCTTTGCAAGCATGGGAATGTGGAAGAGGCTGAAGAGTTTATGCTTGTGAATAAGAAGCTCTTCCCTCTTGAGATTGAGAGCTTTAACATTATCCTTAATGGATGGTGTAACTTGACATGTGATGTATTTGAAGCAAAAAGAGTTTGGAGAGAAATGGCTGAATACTGTATAACGCCAGATGCTATTTCATATAGCCACATGATTTCCTGTTTTTCAAAGACAAGGAATCTTTTTGACTCTCTTAGACTCTATGATCAGATGAAGAAAAGGGGATGGATCCCTGGGATAGAGGTTTACAATTCTCTAGTGTATGTTTTAACTTGTGAAAATTGTTTGAAGGAAGCTGTCAAGATTATAGATAAGATGAAGGAAGAGGGTTTGCAGCCAGATTCTGCTACCTTCAATGCCATGATACGCCCTCTTTGTGAAGCTGGAAAACTAGCAGGGGCAAGAGTTATGTTAAACACAATGGTAGAAGAGAATGTTAGTCCAACCATTGAGACCTACCATGCATTTTTTGAGGGGACGGATTACCAAGGAACATTGGAATTTCTGAGTAGGATGAAAGGTTCTGGTTTGGGTCCAAATGAGGATTCCTTTCTCATAATTCTGGTTAAATTCTTCAAGTTGAAACAACCTGCAAATGCCCTGAAAATTTGGCTGGAAATGAAGACATACAATGTGGTGCCAAGTTGCTTGCATTACAGAACAATGGTAGAAGGGCTTGTAACATGTAGGTGGTTCACAAAGGCCAAGGATTTTTATGAGGAGATGATTTCAAAAGGATGTTCCGAAGATCCAAAGCTTAATAAGCTCTTTCAGAAAATAGTCGATAGTGGTCATAAAGGAAAACAGAATACTAAAAAGGCTAATAGTGATAGAAGTTTGAGTGTCCTGAAAACAAGATGA 2826 0.4218 MADLKERLLPPKPASAFNVREPVNRPSASGRQTFQGVDVLGLKKRGQGLRSWIRVDTSGNSQAIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLHYVMELQRRLTSTGVGEVWQSDSSDMNRRRGSRNFENVYSNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMELSFCGDQSVMGYRSVDGASISAPVSPVASPPDSRRLEKSLSIARSRYESTRSTESSTESIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEISLFNVPSAFQWVLIITGQCLYIKIIKGVLLHPCHAMDLPHEERGVRLKRPQLIGSANNVFLVLFHAFHQTASLPSQTHPSAPFNFHFDDPPPPRQFLELLKRAANFSSQAEAATHLDHSGLEANRDLICSAIWALREEWQPALVAFKWGGKFHCFDEKACNLMIWVLGTHGKFSTAWCIIRDMHCSSLSTRSAMLIMIDRYAAANNSEKAIQTFNFMEKFRLTPDQEAYHALLNALCKHGNVEEAEEFMLVNKKLFPLEIESFNIILNGWCNLTCDVFEAKRVWREMAEYCITPDAISYSHMISCFSKTRNLFDSLRLYDQMKKRGWIPGIEVYNSLVYVLTCENCLKEAVKIIDKMKEEGLQPDSATFNAMIRPLCEAGKLAGARVMLNTMVEENVSPTIETYHAFFEGTDYQGTLEFLSRMKGSGLGPNEDSFLIILVKFFKLKQPANALKIWLEMKTYNVVPSCLHYRTMVEGLVTCRWFTKAKDFYEEMISKGCSEDPKLNKLFQKIVDSGHKGKQNTKKANSDRSLSVLKTR* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1438 941 Pfam PPR repeat 874 902 IPR002885 -
Aev10g1438 941 Pfam PPR repeat 600 624 IPR002885 -
Aev10g1438 941 Pfam PPR repeat 632 652 IPR002885 -
Aev10g1438 941 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 769 803 IPR002885 -
Aev10g1438 941 Pfam Pentacotripeptide-repeat region of PRORP 703 843 IPR033443 -
Aev10g1438 941 Gene3D Magnesium transport protein CorA, transmembrane region 381 430 - -
Aev10g1438 941 Gene3D - 40 122 - -
Aev10g1438 941 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 699 733 IPR002885 -
Aev10g1438 941 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 870 904 IPR002885 -
Aev10g1438 941 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 380 423 IPR045863 -
Aev10g1438 941 PANTHER MAGNESIUM TRANSPORTER MRS2-10 3 426 - -
Aev10g1438 941 Gene3D Tetratricopeptide repeat domain 656 813 IPR011990 GO:0005515
Aev10g1438 941 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 3 426 IPR039204 -
Aev10g1438 941 TIGRFAM PPR: pentatricopeptide repeat domain 701 733 IPR002885 -
Aev10g1438 941 TIGRFAM PPR: pentatricopeptide repeat domain 737 770 IPR002885 -
Aev10g1438 941 TIGRFAM PPR: pentatricopeptide repeat domain 632 652 IPR002885 -
Aev10g1438 941 TIGRFAM PPR: pentatricopeptide repeat domain 874 903 IPR002885 -
Aev10g1438 941 TIGRFAM PPR: pentatricopeptide repeat domain 772 804 IPR002885 -
Aev10g1438 941 CDD Mrs2_Mfm1p-like 52 421 IPR039204 -
Aev10g1438 941 Gene3D Tetratricopeptide repeat domain 554 655 IPR011990 GO:0005515
Aev10g1438 941 Gene3D Tetratricopeptide repeat domain 814 936 IPR011990 GO:0005515
Aev10g1438 941 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 663 698 IPR002885 -
Aev10g1438 941 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 734 768 IPR002885 -
Aev10g1438 941 Gene3D Magnesium transport protein CorA, transmembrane region 123 374 - -
Aev10g1438 941 MobiDBLite consensus disorder prediction 920 941 - -
Aev10g1438 941 Coils Coil 224 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1438 Aev-Chr10 17686527 17691867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1438 1 426 MRS2 Gene Family AT1G16010 84.309 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1438 K16075 - gmx:100815237 749.584