Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1429 ATGATCATGGCTTCATCATCAGAGAAAGGCCTGAATGAGAGTAGGAAGCAGCGGCGAGCACGTAAAAGCATCCCAATAGACCATCCATCACCACGAATTAGAAGTTCAATTTACCGTGGCGTCACAAGGCATCGATGGACTGGTCGATACGAGGCTCATTTATGGGACAAGAATTCCTGGAATGAATCACAGACCAAGAAAGGAAGACAAGGGGCATATGACGATGAAGATGCAGCAGCACATGCCTATGACTTGGCAGCATTGAAGTATTGGGGCCATCATTCTTCCATTCTCAATTTTCCATTATCAGATTATGAAGTGGAGCTTAAGGAGATGGAAAATCAATCCAAAGAAGAATATATTGGATCCTTGAGAAGAAAAAGTAGTGGGTTCTCTCGTGGAGTCTCAAAATATAGAGGCGTAGCAAGACACCATCACAATGGAAGATGGGAAGCTCGAATTGGCAGAGTCTTGGGCAACAAATATCTATACCTTGGAACTTACGCTACACAGGAAGAAGCAGCGGCAGCATATGATAAGGCAGCTATTGAATACCGTGGACTTAATGCTGTTACAAATTTTGACCTTAGTCGTTATATCAAATGGCTAAGTCCTAAAACACAATCTGAACCTCAATCTGGTGGTGGTGACCATGATGCAGCCACTGCCACCGGCAAATCCAAATTCAAAGACGTGATCACCACTTGTCCTGCACAACCTCTTCCTTCACAGACCTCAATTAATCCTCCTCCTCGCCGTACATTCCCAGAAGATATTCAGACATTTTTTGAAAGCCAAGATGATTCTGGGAGTGATGACATTATATTTGGCGACTTGACCTCAATCGCTGCACCGATTTTTCACTGTGAACTCGATGCTTAG 882 0.4388 MIMASSSEKGLNESRKQRRARKSIPIDHPSPRIRSSIYRGVTRHRWTGRYEAHLWDKNSWNESQTKKGRQGAYDDEDAAAHAYDLAALKYWGHHSSILNFPLSDYEVELKEMENQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVLGNKYLYLGTYATQEEAAAAYDKAAIEYRGLNAVTNFDLSRYIKWLSPKTQSEPQSGGGDHDAATATGKSKFKDVITTCPAQPLPSQTSINPPPRRTFPEDIQTFFESQDDSGSDDIIFGDLTSIAAPIFHCELDA* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1429 293 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12 210 - -
Aev10g1429 293 Gene3D AP2/ERF domain 136 197 IPR036955 GO:0003700|GO:0006355
Aev10g1429 293 Gene3D AP2/ERF domain 37 104 IPR036955 GO:0003700|GO:0006355
Aev10g1429 293 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Aev10g1429 293 PRINTS Ethylene responsive element binding protein signature 177 197 IPR001471 GO:0003700|GO:0006355
Aev10g1429 293 MobiDBLite consensus disorder prediction 1 33 - -
Aev10g1429 293 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12 210 - -
Aev10g1429 293 SUPERFAMILY DNA-binding domain 36 103 IPR016177 GO:0003677
Aev10g1429 293 ProSiteProfiles AP2/ERF domain profile. 137 195 IPR001471 GO:0003700|GO:0006355
Aev10g1429 293 Pfam AP2 domain 136 187 IPR001471 GO:0003700|GO:0006355
Aev10g1429 293 Pfam AP2 domain 37 93 IPR001471 GO:0003700|GO:0006355
Aev10g1429 293 ProSiteProfiles AP2/ERF domain profile. 37 101 IPR001471 GO:0003700|GO:0006355
Aev10g1429 293 CDD AP2 136 197 IPR001471 GO:0003700|GO:0006355
Aev10g1429 293 SMART rav1_2 37 107 IPR001471 GO:0003700|GO:0006355
Aev10g1429 293 SMART rav1_2 137 201 IPR001471 GO:0003700|GO:0006355
Aev10g1429 293 MobiDBLite consensus disorder prediction 11 28 - -
Aev10g1429 293 SUPERFAMILY DNA-binding domain 136 197 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1429 Aev-Chr10 17613506 17616980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1429 34 199 AP2-EREBP Transcription Factor Family AT5G57390 70.414 1.43e-81 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Aev10g1429 AP2 8.8e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1429 K09285 - gmx:100807781 363.999