Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1420 ATGCAATTAGCATCAAATGGTGACAAGGAACAATGTTCAGAAACTGAACCCATCTTGAATCAGCACCATCTAAACTCGCAAGCATCTGGAGAGTCTTCATTTTCCTGTGAAATTATTGCTTCTTCCAGTGATGATTTACATAATGTTCATGTTGACGAGACTTGTCATCTAGTGAACCCAGATCAGCCACAATGCCGGATATGCCTTGATATCGGAGGAGAAGATTTGATTGCTCCCTGCCATTGCAAAGGTACCCAAAAATACGTACACAGATCATGTCTCGATAATTGGAGGTCTACAAAGGAGGGCTTTGCTTTTTCACACTGTACAGAGTGCAGGGCTGTCTTCATATTACGTGCAAATGTTCCACCAGATCGGTGGTGGTTGAGATTAAAGTTTCAGTTCCTTGTTGCCAGAGACCATGCATTCATTTTCATAATTGTTCAACTGGTTGTTGCTTTCTTGGGGGTGCTTGTGTACAAATTTTATGGAGATGAACTGAGGGAAATGTTTGGTTATGAAGAACATCCATATGGATTTTATACAATGGCTGTTCTAGCCATTGTTTTGGTGGGCTTGCTCTATGGCTTCTTCATAGCCATAATATGTGGCCAAAGAATCAATGAACGGCACTACCATGTTCTTGCCAAACAAGAATTGACAAAGGAATATGTGGTACAAGATCGAGAACATGTGAAGAATGTGCCAGAACTTGATCCCAGCCATGTGACAGAGCTAAGGATGTTGGGCCTTTACTAA 759 0.415 MQLASNGDKEQCSETEPILNQHHLNSQASGESSFSCEIIASSSDDLHNVHVDETCHLVNPDQPQCRICLDIGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECRAVFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDELREMFGYEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVQDREHVKNVPELDPSHVTELRMLGLY* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1420 252 CDD RING_CH-C4HC3_MARCH 65 113 - -
Aev10g1420 252 SMART ringv_2 64 113 IPR011016 GO:0008270
Aev10g1420 252 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 2 251 - -
Aev10g1420 252 PANTHER OS02G0132300 PROTEIN 2 251 - -
Aev10g1420 252 Pfam RING-variant domain 65 112 IPR011016 GO:0008270
Aev10g1420 252 ProSiteProfiles Zinc finger RING-CH-type profile. 57 119 IPR011016 GO:0008270
Aev10g1420 252 SUPERFAMILY RING/U-box 60 116 - -
Aev10g1420 252 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 117 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1420 Aev-Chr10 17553751 17556176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1420 31 211 C3H Transcription Factor Family AT1G50440 67.016 3.05e-89 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1420 - - gmx:100789593 491.5