Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1406 ATGGAGAGCACAGACTCATCCACGGGGTCTCAACAACCGAACCTTCCACCAGGATTCAGGTTCCATCCCACCGATGAAGAGCTTGTAGTTCACTACCTCAAGAAGAAAGCCGCATCAGCTCCTTTACCAGTCTCCATCATCGCCGAGGTTGATCTCTACAAGTTCGATCCATGGGAGCTTCCAGCTAAGGCGACGTTTGGGGAGCAGGAGTGGTATTTCTTTAGCCCAAGGGACAGGAAGTACCCGAACGGGGCGAGGCCAAACAGGGCGGCGACTTCCGGGTACTGGAAGGCGACGGGGACAGATAAGCCTGTGTTGACCTCTGGTGGGACACAGAAGGTTGGAGTGAAGAAAGCTTTGGTTTTCTATGGAGGGAAGCCACCAAGAGGGATCAAGACCAATTGGATCATGCATGAGTATAGGCTTGCTGATAATAAGCCTAACAATAGGCCTCCCGGCTGTGACTTGGGCAACAAGAAAAACTCTCTCAGGCTTGATGATTGGGTGCTGTGCCGAATCTACAAGAAGAACAACACACATAGGTCCCCTCTGGAACATGACAGGGAAGATTCAATGGATGACATGATTGGAGGGATCCCTCCTTCCATCAACGTGGGCCACACGATGAATGCTAATAGATTTCACCACTTTTCCAAGATGTCCACAACCTACACTTCCACTGCTGCATTGTTGGAAAATGACCATCACAGCAACACCAACACCCTATTGGATGGGATCATGTTAGGAGGAAACGCCACAAACTCTGCTGCACATCATCATCACTTGGGATTATCTGCCTCAAACTCCAACAATAACTCTGCCTCTAAGAGGACGCTCTCATCTCTGTACTGGAGCGAGGAGGATGTTGCTGCAGCAGCTGCGGCTGCTGCAGCAGGAACTTCCTCGTCCAGCAAGAGGTTCAATTTGGAGAGTGATGATAATACTAATCATCATCATCATGGAAGTGTTGTGAGGACAGATCAAGAGAATAATAATGGCTCTTTTGCAACCCTGTTGAACCAGCTACCTCAAACCCCTTCTTCATTGCACCAACAAACCATGATTGGATCAATAGGTGATGGATTACTTAGGACACCTTATCAAATTCCAGGGATGAATTGGTATGCTTAA 1131 0.4854 MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVSIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKNNTHRSPLEHDREDSMDDMIGGIPPSINVGHTMNANRFHHFSKMSTTYTSTAALLENDHHSNTNTLLDGIMLGGNATNSAAHHHHLGLSASNSNNNSASKRTLSSLYWSEEDVAAAAAAAAAGTSSSSKRFNLESDDNTNHHHHGSVVRTDQENNNGSFATLLNQLPQTPSSLHQQTMIGSIGDGLLRTPYQIPGMNWYA* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1406 376 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Aev10g1406 376 MobiDBLite consensus disorder prediction 1 20 - -
Aev10g1406 376 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 351 - -
Aev10g1406 376 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Aev10g1406 376 PANTHER NAC TRANSCRIPTION FACTOR 56 1 351 - -
Aev10g1406 376 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Aev10g1406 376 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Aev10g1406 376 MobiDBLite consensus disorder prediction 1 17 - -
Aev10g1406 376 MobiDBLite consensus disorder prediction 310 325 - -
Aev10g1406 376 MobiDBLite consensus disorder prediction 301 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1406 Aev-Chr10 17434320 17435987 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1406 1 376 NAC Transcription Factor Family AT3G15510 53.807 1.12e-126 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev10g1406 NAM 1.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1406 - - gmx:100170710 580.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1406 10 17434320 17435987 Aev10g1406 10 17434320 17435987 ECH