Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1404 ATGGGAGTCCCAGAGAGAGACCCTCTTTCACAATTGAGTTTGCCACCGGGTTTCCGATTTTACCCCACCGACGAGGAGCTTCTCGTTCAGTATCTGTGCCGTAAGGTTGCTGGCCATCATTTCTCTCTCCAAATCATCGCAGAAATTGATCTCTACAAGTTCGACCCATGGGTTCTTCCAAGCAAGGCGATATTCGGTGAGAAGGAGTGGTATTTTTTTAGCCCACGAGACAGGAAGTACCCGAACGGGTCAAGACCCAACAGGGTAGCTGGGTCTGGGTATTGGAAAGCCACGGGAACCGATAAGATCATCAGCACCGAAGGCAGAAAAGTTGGAATCAAGAAAGCACTTGTTTTCTATGTTGGAAAAGCCCCCAAAGGCACCAAAACCAATTGGATTATGCACGAGTATCGCCTTCTCGACTCTTCCCGAAAGAACGGCAGCACTAAGCTTGACGATTGGGTTCTGTGCCGGATATATAAGAAAAACTCAAGCGCGCAGCAGAAGACAGTGATTTCAACAAACGGCGTCGTTTCCAGCAACGAGTACACACAGTACAGCAACGGCTCCTCCTCTTCATCCTCTTCCCACCTCGACGACGTTCTCGAGTCCCTGCCCGAGATTGACGACCGCTGCTTCGCCCTCCCACGTGTCAACTCCTTGAGGGCCCTGCACCACAATGAAGACAACAAGTTGGCCCTCCAGCAGGGCCTCGTTGGGCCTGCAAGCTTCGCAGACTGGGCCGGCCAAGGCGTTATAACCTCCTTAGCTGCTGAGTTGGCCCAGGCCCAACAAGGGATCGTCAACTTCAACCCAAATGACCTTTTTGTCCCTTCCATCGAGGAGGAGGTTCAGAGCGGGGTGAAGGCTCAACGGGTCGACAATTCCGGGTTCTATCAGCAGGGTCCGACTCAGAATGACTTCACACAGGGATTCTCGAACCAAGTTGACCCGTATGGGTTTAGGTACCCGGCTCAATCGGTCGGATTCGGGTTCAGGCAATGA 1005 0.5254 MGVPERDPLSQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRKNGSTKLDDWVLCRIYKKNSSAQQKTVISTNGVVSSNEYTQYSNGSSSSSSSHLDDVLESLPEIDDRCFALPRVNSLRALHHNEDNKLALQQGLVGPASFADWAGQGVITSLAAELAQAQQGIVNFNPNDLFVPSIEEEVQSGVKAQRVDNSGFYQQGPTQNDFTQGFSNQVDPYGFRYPAQSVGFGFRQ* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1404 334 PANTHER NAC TRANSCRIPTION FACTOR 56 1 296 - -
Aev10g1404 334 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
Aev10g1404 334 SUPERFAMILY NAC domain 10 163 IPR036093 GO:0003677|GO:0006355
Aev10g1404 334 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Aev10g1404 334 PANTHER NAC DOMAIN-CONTAINING PROTEIN 55 1 296 - -
Aev10g1404 334 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1404 Aev-Chr10 17411090 17412309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1404 1 321 NAC Transcription Factor Family AT1G52890 60.000 5.40e-125 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev10g1404 NAM 6.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1404 - - gmx:100170718 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1404 10 17411090 17412309 Aev10g1404 10 17411090 17412309 ECH