Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1402 ATGGCAAGAGAGATGGTAGACATTGAATCTCAAACCACTAGGAGAGTGAATGATCAGGAAGTTCCTCATGTGTTCCGAAAGAGGAAAACTCCTGTTACTCTCAAGTTTGATGATGTGGTGTACAAGATCAAGATGGAGAAGGGAGGACTACTTGAGAAGAAGAACACAAAGGCAGAAGAGAAAGTGATTCTGAAAGGGGTAACTGGGATTGTTGAGCCAGGTGAGATGCTTGCCATGTTGGGTCCCTCAGGAAGTGGCAAAACTACTCTCTTAACTGCCTTAGGAGGAAGGCTTGGTGGCAGGCTCAATGGCAAAATCACCTACAATGGCGACCCTTTCTCTAATTCCATGAAGAGGAACACCGGCTTTGTCACTCAGGACGATGTTCTCTACCCTCATTTAACCGTCACCGAAACCCTAGTCTTCACTGCTCTCCTCAGGTTGCCAAACACAATCCCAAAGGAAGAGAAAATAGCACATGCACAAGCAGTGATGGAACAACTTGGGTTGACAAGGTGCAAGGATAGCATAGTAGGAGGGCCTGATCTGAGGGGAGTTTCAGGGGGTGAGAGGAAAAGGGTTAGTGTAGGGCAAGAACTGCTTATAAACCCAAGCTTGCTGTTCCTTGATGAGCCAACTTCAGGGCTTGACTCGACCACTGCACTGAAGATTGTGTCCACTCTGTGGGAGCTTGCAAGGGGTGGCAGGACCATTGTTATGACCATTCACCAACCTTCTAGCAGGCTTTACTACATGTTCCATAAGGTCTTGCTTCTCTCTGATGGCAACCCTTTGTATTTTGGGAAAGGCTCTGAGGCTATGGATTATTTCTCTGCTCTTGGATATGCCCCTGCATTGGCCATGAACCCCTCTGATTTCCTCTTGGATCTTGCAAATGGAATCTACACCAATGAATTGAATGAGGATTGTGTGATAGACAAGCAGGAATTGGTTCATGGATATAAGAGTCACTTTGATTCCAAAATGAGGCCAATGCTTCAAGAAGCAGCAAGTGTTGAAGAAGTACAGGGCAGAGTTGAAGGCACAGGGTATGGGAAATGGCCTACAAGTTGGTGGGAGCAATTCTATGTGCTCTTAAGGAGAGACATCAAAGAGAGAAGGCATGAAGCATTCTCTTTCTTCCATATGTGTCAAGTCCTTTTGGTTGCTCTCATCACAGGACTCTTGTGGTATAAGTCTGATACCTCACACTTGCAGGATCAGATTGGGCTTCTGTTCTTCATATCATCATTCTGGAGTTTCTTACCTCTGTACAGAGCAATCTTTGTGTTCCCTCAAGAAAAAGTGATGCTTGAGAAAGAAAGATCCTCAGGAATGTACAGGCTCTCATCATACTACATCTCAAGGATAGTAGCTGATCTTCCAATGGAACTCATCCCCCCAATAATTTTCATGATCATAACATATTGGATGACAGGTCTCAAAACAAATGTGGTCAATTTCCTATTCACACTGCTAAGTGTTCTGCTCCTAGTGCTTGTGTCACAAGGACTAGGCCTAGCACTCGGTGCTGTGGTTCAGGAGGAGAAATCAGCCTCAACACTTGCATCAGTTCTAGGAATAACATTTATGTGTGCAAGTGGATTCTATGTTCAGCATGTGCCTAAGTTCATAGGGTGGGTCAAGTATGTCTCAATTCTTTACTACACAAATCAGTTATTTGTTCTGTCTCAGTTTCATGCTGGGGAGACATACCCTTGTGGTGGAGGACACTGCCTTGTTGAGGACTTTCCTTCTATAAAGGACATGGGCTTCACTCTTCATGGACAAGTGCAGGCTTCATTGGCTCTCATTGGAATGCTTATTGGTTATAGGCTCACTGCTTATCTTGCTCTTATGAGGATTGGGGTCACCAAGAAATTGGTCTAG 1890 0.4487 MAREMVDIESQTTRRVNDQEVPHVFRKRKTPVTLKFDDVVYKIKMEKGGLLEKKNTKAEEKVILKGVTGIVEPGEMLAMLGPSGSGKTTLLTALGGRLGGRLNGKITYNGDPFSNSMKRNTGFVTQDDVLYPHLTVTETLVFTALLRLPNTIPKEEKIAHAQAVMEQLGLTRCKDSIVGGPDLRGVSGGERKRVSVGQELLINPSLLFLDEPTSGLDSTTALKIVSTLWELARGGRTIVMTIHQPSSRLYYMFHKVLLLSDGNPLYFGKGSEAMDYFSALGYAPALAMNPSDFLLDLANGIYTNELNEDCVIDKQELVHGYKSHFDSKMRPMLQEAASVEEVQGRVEGTGYGKWPTSWWEQFYVLLRRDIKERRHEAFSFFHMCQVLLVALITGLLWYKSDTSHLQDQIGLLFFISSFWSFLPLYRAIFVFPQEKVMLEKERSSGMYRLSSYYISRIVADLPMELIPPIIFMIITYWMTGLKTNVVNFLFTLLSVLLLVLVSQGLGLALGAVVQEEKSASTLASVLGITFMCASGFYVQHVPKFIGWVKYVSILYYTNQLFVLSQFHAGETYPCGGGHCLVEDFPSIKDMGFTLHGQVQASLALIGMLIGYRLTAYLALMRIGVTKKLV* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1402 629 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 286 IPR003439 GO:0005524
Aev10g1402 629 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 279 IPR027417 -
Aev10g1402 629 Pfam ABC transporter 64 214 IPR003439 GO:0005524
Aev10g1402 629 ProSitePatterns ABC transporters family signature. 186 200 IPR017871 GO:0005524
Aev10g1402 629 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 15 623 - -
Aev10g1402 629 Pfam ABC-2 type transporter 360 565 IPR013525 GO:0016020|GO:0140359
Aev10g1402 629 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 15 623 - -
Aev10g1402 629 Pfam ABC-2 type transporter 243 335 IPR043926 GO:0140359
Aev10g1402 629 Gene3D - 51 280 IPR027417 -
Aev10g1402 629 SMART AAA_5 73 263 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1402 Aev-Chr10 17393434 17397335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1402 63 262 Calmodulin-binding Proteins AT2G36910 24.272 8.32e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1402 K05681 - gmx:100816135 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1402 10 17393434 17397335 Aev10g1402 10 17393434 17397335 ECH