Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1381 ATGGCCGACCTCATAGAATTTCTCCCCTTAATCATAACTTTTGATACCAAAACATGTCTCATTTTTTGTGCCACAATAACATTGTTCTTCTTCATCTTCTACCAAATCTTCAATGGCCTATTCTTTTGGTTTTTGGAAATTAGGCCAAATGAATTACATTATGATATTGAACAAGGGATTGATCAACTAGCTTATGGTGTATCACCTCATGAAGTTACAATTCTTAGAGCTCTTATCCATAGAGACATGGAGGGTTGGGCTATGGTGGCTATGGTTGAAGAAGATGAAGATATTTACTATGAGCAAAGAGGTCAAAATCTTAGGGATTCAAAGAAATTGCCACCATTGGTTAACTATGGAATGCATGATGAGAAGATAGTAAGAAATTGTGATGATTGTGCAATTTGTTTGGAAGATTTTGAAGTTGGTCAATTTTGTCAAGAACTTCCTATGTGCAAGCACATTTTTCATTCGGGTTGTATAGATAATTGGTTACATAGGAAATTAACATGTCCAATATGTCGAAGTAAAATAATGTAG 540 0.3463 MADLIEFLPLIITFDTKTCLIFCATITLFFFIFYQIFNGLFFWFLEIRPNELHYDIEQGIDQLAYGVSPHEVTILRALIHRDMEGWAMVAMVEEDEDIYYEQRGQNLRDSKKLPPLVNYGMHDEKIVRNCDDCAICLEDFEVGQFCQELPMCKHIFHSGCIDNWLHRKLTCPICRSKIM* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1381 179 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 179 IPR013083 -
Aev10g1381 179 SMART ring_2 133 174 IPR001841 -
Aev10g1381 179 CDD RING-H2_PA-TM-RING 132 175 - -
Aev10g1381 179 SUPERFAMILY RING/U-box 132 178 - -
Aev10g1381 179 ProSiteProfiles Zinc finger RING-type profile. 133 175 IPR001841 -
Aev10g1381 179 Pfam Ring finger domain 131 175 IPR001841 -
Aev10g1381 179 PANTHER RING FINGER DOMAIN-CONTAINING 14 177 - -
Aev10g1381 179 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 14 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1381 Aev-Chr10 17198144 17198683 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1381 93 178 C3H Transcription Factor Family AT1G74410 42.045 2.25e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1381 - - gmx:102660073 203.756