Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1349 ATGGAGGCCAAGATGATGATTGAGAGGAAGAGAGTTTCATCAGTTGAGAAGATGGTGAGGAAGGATAACATAGTTGAGGAGGTGGAAGATGAGGTAGAGGAGGAGGATGAAGGTGTTCTTGCAGAGGAAGAAAAGAAGAGAGGTGGTTCTGCTGGTGGAGGAAGTGGAAGTGGAAGTGGGAGCAGAAGAGGCTCAAGTGGTGGTGGTGGTGGAGTTTCACCACCTTCATGCCAGGCTGAGAGGTGTGGTGCTGATTTAACCGATGCGAAGCGATACCATCGCCGCCATAAGGTTTGTGAGTTTCATTCCAAGGCACCTGTGGTGGTGGTTGCAGGGCTGAGGCAGAGGTTTTGCCAGCAATGTAGCAGGTTCCATGACCTGGCAGAGTTTGATGAAGCTAAAAGAAGCTGCCGAAGGCGCTTGGCCGGACACAACGAGCGGCGCCGGAAAAGCAACGTAGAAACTTGCAACGACGGAAGCAGCCGCAGCAAAGGGCAACAAGCCCCTAAGGACAGCAGCCACTGCAGAAATGCCGATGACCGGGGAAGGATTCAGATGAACATGGCAGGGAGCTCTGGTTACAAGTCCTTTCATATCAGATGA 603 0.5224 MEAKMMIERKRVSSVEKMVRKDNIVEEVEDEVEEEDEGVLAEEEKKRGGSAGGGSGSGSGSRRGSSGGGGGVSPPSCQAERCGADLTDAKRYHRRHKVCEFHSKAPVVVVAGLRQRFCQQCSRFHDLAEFDEAKRSCRRRLAGHNERRRKSNVETCNDGSSRSKGQQAPKDSSHCRNADDRGRIQMNMAGSSGYKSFHIR* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1349 200 Coils Coil 25 45 - -
Aev10g1349 200 MobiDBLite consensus disorder prediction 156 172 - -
Aev10g1349 200 MobiDBLite consensus disorder prediction 18 78 - -
Aev10g1349 200 Gene3D - 67 138 IPR036893 GO:0003677|GO:0005634
Aev10g1349 200 Pfam SBP domain 77 150 IPR004333 GO:0003677
Aev10g1349 200 MobiDBLite consensus disorder prediction 143 181 - -
Aev10g1349 200 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13 200 - -
Aev10g1349 200 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 13 200 IPR044817 GO:0003677
Aev10g1349 200 SUPERFAMILY SBT domain 75 155 IPR036893 GO:0003677|GO:0005634
Aev10g1349 200 ProSiteProfiles Zinc finger SBP-type profile. 74 151 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1349 Aev-Chr10 16985123 16986145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1349 6 168 SBP-box Gene Family AT3G60030 46.626 1.19e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aev10g1349 SBP 1.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1349 - - aprc:113864686 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1349 10 16985123 16986145 Aev04g0558 04 3467123 3469476 ECH
Aev10g1349 10 16985123 16986145 Aev03g0113 03 1032877 1035177 ECH
Aev10g1349 10 16985123 16986145 Aev10g1349 10 16985123 16986145 ECH