Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1341 ATGGCTCCCAGAGACAGAGTCGCCGCCCCCAACCCCAACCCCAACCCAACCCTACACAACGCCGCCAAGGAGATCCGCTATAGGGGCGTCAGGAAGCGCCCATGGGGCCGTTACGCCGCCGAGATCCGCGACCCAGGCAAGAAGACGCGCGTCTGGCTCGGCACCTTCGACACCGCTGAGGAGGCCGCGCGTGCCTACGACGCCGCGGCTCGCGAGTTCCGCGGCGCTAAGGCTAAGACCAATTTTCCGACCCCCTCGGAGCTCATGAACAACAACCTCGTCCTCCCCAACAGCATTAACAACGCGCGTAGCCCTAGTCAGAGCAGCACGCTCGACTCTTCCTCCCCTCCTCCTCCTCCGCCACCGCCGCAGGCGGCGCAGCCGCCGCATCTAGACCTAACTCTTTCGCCGTTCTCCGCTACAGCCGCCGCCGCCATGGCTTTCCCGGTGGCGCGTCCAGTGCTATTCTTCGACGCGTTCGCGCGTGCGGAGTCCGTGGCTCGCCGTGACGCGTGTGGGTTCCGTGGCGGCGCGTGTAGCGACTCCGATTCTTCCTCCGTCGTGGACTACGAGCGCGTGCCGCCTCGCAGCGTGCTCCTGGATCTCGATCTCAACGTGGCTCCTCCACCGGAAGTCGCGTGA 642 0.662 MAPRDRVAAPNPNPNPTLHNAAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDAAAREFRGAKAKTNFPTPSELMNNNLVLPNSINNARSPSQSSTLDSSSPPPPPPPPQAAQPPHLDLTLSPFSATAAAAMAFPVARPVLFFDAFARAESVARRDACGFRGGACSDSDSSSVVDYERVPPRSVLLDLDLNVAPPPEVA* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1341 213 Gene3D AP2/ERF domain 25 84 IPR036955 GO:0003700|GO:0006355
Aev10g1341 213 CDD AP2 26 83 IPR001471 GO:0003700|GO:0006355
Aev10g1341 213 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4 14 195 - -
Aev10g1341 213 SUPERFAMILY DNA-binding domain 26 84 IPR016177 GO:0003677
Aev10g1341 213 SMART rav1_2 26 89 IPR001471 GO:0003700|GO:0006355
Aev10g1341 213 ProSiteProfiles AP2/ERF domain profile. 26 83 IPR001471 GO:0003700|GO:0006355
Aev10g1341 213 MobiDBLite consensus disorder prediction 112 128 - -
Aev10g1341 213 MobiDBLite consensus disorder prediction 78 132 - -
Aev10g1341 213 Pfam AP2 domain 26 75 IPR001471 GO:0003700|GO:0006355
Aev10g1341 213 PRINTS Ethylene responsive element binding protein signature 49 65 IPR001471 GO:0003700|GO:0006355
Aev10g1341 213 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Aev10g1341 213 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 14 195 - -
Aev10g1341 213 MobiDBLite consensus disorder prediction 83 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1341 Aev-Chr10 16900431 16901072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1341 10 161 AP2-EREBP Transcription Factor Family AT3G15210 61.688 1.09e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev10g1341 AP2 2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1341 K09286 - gmx:100813652 200.675