Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1329 ATGGATCAGATGATAGCTTCAGAAATGGATCAACAGAGGCAAGGACATTTTCAGTCAGAACCCAGTATTGTTCAAAGAGGCACTGGCATCTCACAGCCGAGTATCCGCACAGTGGTGGCAGCTCCTGGGAACACAAGTAGTCATGATGCCCACTACTTACCACCAGATGCTTATGACAATGCCGGTGTATATGTAACACAATACGGTGGCATCCAACATCCACATAATCTTAATATGGGGGTTGCAGCTGCACCGAACTTGTATTATTCTGGCATGAACCCTTCATCGAGTACCGGTGTATTCCCTATGCCTATAAACCACAGAGCCTCTGATTTGCCAGGATCAAGCACATATGCAGTCTCCGTAGTTTCTTCAGATAATTTTGGAAGAAGCAGTAGTTACATGGATGATGTCAGAGGTCCATACAAAAGGAAAAGTGCTGAAGCGATTAGAGGGAATTACCAGTATTTCAATGCTCCAGCTAGTTCTTCAACTGCTCCCCCTAATGCCAGACACCCTGATGGGGTTCCTATGATGGATGCTGCGGCATTTTCCCTGCACGTTCCTCCACTTGTGGAAGTAGGACCACATGGTAGTGCATGGAGCAGGCCAGGTGAGTCCATTATGGTGCATGATCATAACCATTTGATTCGAGGAAACTATGTAGGGCCGCACTTTCAGCCACCTCCTCCTCCCTGGTTGGATCAGCAGTTGAGCGGTAATAACAATGATGGGCATACAACAGCTTGGAACCAGTCGCTTCCAATGCCTCCTTATATACAAGCTCCCAGTGTTAATGGAAGTTCTATAGAGAGTGCAAGTATTGTTTTGCAGAGGTATCATGAAACAGTTGGCAACAGAAACGGTGTTAGGTTTCCTCATCCCCCTCCTGTCAACCACCCACACCATAATTATCATCATCCAGCACTACCTATGCAAGCAGTAAGAGGTCACAGTATCAACTTTCACCCTCCGGTGCCTGCCGCTGCATTCAGAGTTCCAACAAATCCTTCACGCGGTGCTCCGATCCCCATGCATAATGGCTTTGACATGGGCCCTAGGCATGCTGGCCCCGTGCCGTCAGGTGGTGTACGGATTTACCGTCCTCATAGGGGAGTCGTGCATGAGGCAGCTATTGGTCATCGTAATCTTCCCCATCTGGGCTTTTTCCATGTTGATGACGTGGCTTTAATTGATGAAGTGGGAAATTTAGTTGACCATCACAGAGATATGCGCCTGGACATAGAGGATATGTCTTATGAGGATCTTCTTGCATTGGGTGAGCGGATTGGGAGTGTGAGCACTGGTTTATCCGAGGAAATAATCACAACTGAGATGAAGACAAAAACATATTTGAAGACTGTTTGTGCTACTAATTCCGAGGAGGCAGCATCTGACGACCGGGAATCTGATTCCTGCATTATATGTCAGGATGAGTATAAGAACCAAGAGAAGATCGGAGTTCTTCGATGCGAGCATGAGTACCATGCGGATTGCTTGAAGAAATGGTTGCTTGTCAAGAATGTGTGCCCCATATGCAAGTCAGAAGCATTGACTCCTGGGAGGAAGGATGCATGA 1578 0.4715 MDQMIASEMDQQRQGHFQSEPSIVQRGTGISQPSIRTVVAAPGNTSSHDAHYLPPDAYDNAGVYVTQYGGIQHPHNLNMGVAAAPNLYYSGMNPSSSTGVFPMPINHRASDLPGSSTYAVSVVSSDNFGRSSSYMDDVRGPYKRKSAEAIRGNYQYFNAPASSSTAPPNARHPDGVPMMDAAAFSLHVPPLVEVGPHGSAWSRPGESIMVHDHNHLIRGNYVGPHFQPPPPPWLDQQLSGNNNDGHTTAWNQSLPMPPYIQAPSVNGSSIESASIVLQRYHETVGNRNGVRFPHPPPVNHPHHNYHHPALPMQAVRGHSINFHPPVPAAAFRVPTNPSRGAPIPMHNGFDMGPRHAGPVPSGGVRIYRPHRGVVHEAAIGHRNLPHLGFFHVDDVALIDEVGNLVDHHRDMRLDIEDMSYEDLLALGERIGSVSTGLSEEIITTEMKTKTYLKTVCATNSEEAASDDRESDSCIICQDEYKNQEKIGVLRCEHEYHADCLKKWLLVKNVCPICKSEALTPGRKDA* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1329 525 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 127 522 IPR045191 GO:0061630
Aev10g1329 525 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 127 522 - -
Aev10g1329 525 SUPERFAMILY RING/U-box 467 518 - -
Aev10g1329 525 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 437 518 IPR013083 -
Aev10g1329 525 Pfam Ring finger domain 471 514 IPR001841 -
Aev10g1329 525 SMART ring_2 473 513 IPR001841 -
Aev10g1329 525 ProSiteProfiles Zinc finger RING-type profile. 473 514 IPR001841 -
Aev10g1329 525 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1329 Aev-Chr10 16814422 16816696 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1329 390 518 C3H Transcription Factor Family AT2G15530 46.512 1.31e-35 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1329 K19041 - gmx:100800642 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1329 10 16814422 16816696 Aev10g1329 10 16814422 16816696 ECH