Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1325 ATGCTGAGAATTGTATTAGGAACATATCATGATGAGGGTGTTGCTGATATAATGCATGTCAGAGGCATAATTGGAGCAATTGCAGATAACAGTTCCCACAATGGTAAAGAGGAGATAGTGGCTATTAAGATGGCATTGCAGGATTTCTATCATTATACTAATCAAAGCTTTGTTCTTCACATAAGGGACTCTCATGGTGATCCTCTTCAGGCTGCTCTTGCAGCTAGAGATCTTATTCATAAGCAGCAAGTGCAAGCAATCATAGGACCACAAACATGGGAAGAAACAAATTTAGTGGCTGATGTTTGCAACAAAACCATGACACCATTGCTATCACTAGCTGATATTACTCCAAATTGGTCAACTTTGAAGTGGCCATCTTTGGTTCAAACCTCACCTAATCCATTAAACCAGATGAAAGCAGTGTCTGCTATTGTTCAATCCTGGGATTGGTACAATGTAAACATCATATATGAAGATAAGGATGCTTCTTCCTCAGAACTTCTATCTCATCTCTATACAGAACTCGGCGAAGCCGGCATAAAAATAAGAAACCTTGTAGCCATCAATCCTTTTGTTTCATCTTCATTGTTACATGAACTTGATAAGCTTAGAGAAGGGGAATGCAGGGTGTTTATTGTGAACTTGTCACTCAATTTGGCCATAAAACTATTTGAAACTGCAAAGAAAATGAACATGATTGAGAAAGATTATGTGTGGATCATCACTGATCCCTTTACAAGCCTTGTCCATTCCTTGAATCCAACCACTCTCTCCTCAATGCAAGGGATCATTGGAGTCAAGAGCTATTTCCCTCAAACGGCGCACGAATTAGACAAGTTCTACCGTAAATTTCGCCGAAAATTCAGCTCAGAGTACCCTCAGGAATTTAACAATGAGCCTGGAATATTTGCAGCATATGCATATGATGCTGCATGGACTCTGGCTCTAGCCATGAGCAAAACCAAAAATAAAGGGTTCAATTTCTTGCTAGATAAGATTTTGCTAAGTAATTTCACTGGCTTGAAGGGAAGAATTCAATTCAATGATCATAAGCTAGATCCTGCAAATACTTTTCAGATCATAAATGTGATAGGAAATGGTTACAATGAAATTGGTTTCTGGTCAAATGGATTAGGCTTCTCAGAGAAAATTGGTCAAAATTTTAGGTACAATTCTTCAATGAAGGAATTGGGACAAGTTATGTGGCCAGGTAGACCTTGGAACACTCCTAGAGGATGGGCTCTGCCAACTATTAAGAAGCCACTAAGAGTTGGTGTTCCTGCTTTGGCCACATTGAAACAATACATAAATATAACTCATGATCAATCTCAAAATGTTACCTTTTTTCAAGGATTTACTATTGATCTTTTTAAAGCAACTATGGAGTTATTGCCCTACCATTTTCCATACAAATTCTATGCTTTCAATGATACCTATGATGAGTTGGTGAAGCAAATTTATTTGAAGAAGTTCGATGCAGTACTCGATGCAACGATAATGTCGTATCGATATCAGTATGCTGAATTCACTCAGCCATACACTGATCCTGGTGTGGTGATGGTAGTCCCTCTCAAATCAAAAACAGGACATAGAGCTTGGCTATTTGTGAAGCCTTTTACAAAGACCATGTGGATTTTGATAGTGGTTGTGATTATCTACAATGGCTTTGTTTTATGGATGTTGGAAAGACAATATTTCCCTGAACTTAAGGGCTCTATGCTGAATCAAACTGGAACCATGGCATGGTTTGCATTGACCCCTCTCATCAACCTAAATGACATAGGGGATAAATTACACAGCAACTTATCAAGGGTGGCTATGGTGGTGTGGCTGTTTGTGGCACTCATCATAACACAGACTTACACAGCTAACCTTACAAGCATGCTAACCGTGGAACGGCTCGAGCCGGCGGTGGACGATGTTGATCAGTTGAGGAATAGCAATGCCATTGTTGGATACAGCACTGGATCCTTCTTGAAAAACTATCTGCATGATGTGTTGCTCTTCCACCCTGAAAACATAAGGCAATTTGGCTCCCTTGAAGAGTTTGCTGAAGCTCTCAGAAGGGAAGAAATTGGAGCTGTGTTTCTTGAATTCCCTGCAGCCAAGATTTTCCTTGCAAAGTACTGTAAAGAGTTTATTCAAGCAGGGCCTATGTACAAAATTGGAGGGTTTGGCTTTGCATTCCCAACAGGGTCACCATATCTTCCTGGAGTAAACAAAGCACTGCTAGACTTATTCGAATCGGGAAAATTGCGCGAATTGGAGAACAGAATGCTTGCATCAGAGAAATGTGATGATGGATCAGAAGCAGATGGAGATACAGCAAGTCTTAGCCCAAACAGCTTCTGGGTTCTGTTCACATTGACAGCAGGAACCTCAACAGTTTCTCTCTTGATCTATGTTGTTGGTGTGAAGTGCTCACAGCTTGAGAAGAGAACAATTTGGAGAGTTATGATGGTGATGATTCAACAATGGGGGCATCATGCGAAGAGACAAATCTCAAGAAAATTCAGTGATGTTGCAGAAACTCATGATGAGAATTCTCACAACACACATCATTTGCCAACTCAAATCTAA 2583 0.4007 MLRIVLGTYHDEGVADIMHVRGIIGAIADNSSHNGKEEIVAIKMALQDFYHYTNQSFVLHIRDSHGDPLQAALAARDLIHKQQVQAIIGPQTWEETNLVADVCNKTMTPLLSLADITPNWSTLKWPSLVQTSPNPLNQMKAVSAIVQSWDWYNVNIIYEDKDASSSELLSHLYTELGEAGIKIRNLVAINPFVSSSLLHELDKLREGECRVFIVNLSLNLAIKLFETAKKMNMIEKDYVWIITDPFTSLVHSLNPTTLSSMQGIIGVKSYFPQTAHELDKFYRKFRRKFSSEYPQEFNNEPGIFAAYAYDAAWTLALAMSKTKNKGFNFLLDKILLSNFTGLKGRIQFNDHKLDPANTFQIINVIGNGYNEIGFWSNGLGFSEKIGQNFRYNSSMKELGQVMWPGRPWNTPRGWALPTIKKPLRVGVPALATLKQYINITHDQSQNVTFFQGFTIDLFKATMELLPYHFPYKFYAFNDTYDELVKQIYLKKFDAVLDATIMSYRYQYAEFTQPYTDPGVVMVVPLKSKTGHRAWLFVKPFTKTMWILIVVVIIYNGFVLWMLERQYFPELKGSMLNQTGTMAWFALTPLINLNDIGDKLHSNLSRVAMVVWLFVALIITQTYTANLTSMLTVERLEPAVDDVDQLRNSNAIVGYSTGSFLKNYLHDVLLFHPENIRQFGSLEEFAEALRREEIGAVFLEFPAAKIFLAKYCKEFIQAGPMYKIGGFGFAFPTGSPYLPGVNKALLDLFESGKLRELENRMLASEKCDDGSEADGDTASLSPNSFWVLFTLTAGTSTVSLLIYVVGVKCSQLEKRTIWRVMMVMIQQWGHHAKRQISRKFSDVAETHDENSHNTHHLPTQI* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1325 860 PIRSF IGluLR_plant 3 859 IPR017103 -
Aev10g1325 860 Pfam Ligand-gated ion channel 760 793 IPR001320 GO:0015276|GO:0016020
Aev10g1325 860 Gene3D - 694 723 - -
Aev10g1325 860 SUPERFAMILY Periplasmic binding protein-like II 400 759 - -
Aev10g1325 860 PANTHER GLUTAMATE RECEPTOR 15 855 - -
Aev10g1325 860 Gene3D - 724 759 - -
Aev10g1325 860 Gene3D - 431 532 - -
Aev10g1325 860 Pfam Bacterial extracellular solute-binding proteins, family 3 450 759 IPR001638 -
Aev10g1325 860 SUPERFAMILY Periplasmic binding protein-like I 24 414 IPR028082 -
Aev10g1325 860 CDD PBP1_GABAb_receptor_plant 24 385 IPR044440 -
Aev10g1325 860 Gene3D - 30 357 - -
Aev10g1325 860 Gene3D - 533 665 - -
Aev10g1325 860 CDD GluR_Plant 421 761 - -
Aev10g1325 860 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 15 855 - -
Aev10g1325 860 Gene3D - 134 377 - -
Aev10g1325 860 Pfam Receptor family ligand binding region 41 366 IPR001828 -
Aev10g1325 860 SMART GluR_14 422 763 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1325 Aev-Chr10 16774954 16778618 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1325 24 813 Ion Channels AT5G11180 32.181 3.97e-138 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1325 - - var:108332761 1181.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1325 10 16774954 16778618 Aev10g1325 10 16774954 16778618 ECH