Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1323 ATGGCGAAAACGAGGCCAGGCAAAAGAGACTTGGACTCGTACACCATCAGAGGCACCAACAAGATCGTAAGAGTTGGTGACTGTGTTCTGATGCGTCCTTCGGACACGTCAAAGCCACCGTACGTGGCGCGCGTGGAGAAGATCGAGAGTGATAGCAGGAACAACGTGAGGGTGCGTGTGAGGTGGTACTACAGGCCTGAAGAGTCCATTGGTGGAAGGAGGCAGTTCCATGGGGCAAAAGAGCTTTTTTTATCTGATCACTATGATATTCAGAGTGCTCACACCATCGAAGGGAAGTGTATTGTTCACTCCTTTAAGAACTACACAAAGCTTGAGAATGTGGGTGCTGAGGATTACTATTGTAGGTTTGAGTACAAAGCTGCTACTGGAGCTTTCACTCCTGACCGTGTTGCTGTATATTGCAAGTGTGAGATGCCTTATAACCCGGATGACCTCATGGTGCAGTGTGAGGGTTGCAAGGATTGGTACCATCCTGCTTGCGTTGGAATGACTATTGAAGAAGCTAAGAAATTGGAGCATTTTGTATGTTCTGAATGTTCGTCCGATGATGACATGAAGAAACCCCAGGCTACATTTCCTGTGTCACCCGTATCTGATTGCAAGGTGAGACTGCCCATATCTAGTTCCAAGTAA 654 0.474 MAKTRPGKRDLDSYTIRGTNKIVRVGDCVLMRPSDTSKPPYVARVEKIESDSRNNVRVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDIQSAHTIEGKCIVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLEHFVCSECSSDDDMKKPQATFPVSPVSDCKVRLPISSSK* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1323 217 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 199 IPR013083 -
Aev10g1323 217 SUPERFAMILY FYVE/PHD zinc finger 132 191 IPR011011 -
Aev10g1323 217 Pfam PHD-finger 140 188 IPR019787 -
Aev10g1323 217 Pfam BAH domain 23 135 IPR001025 GO:0003682
Aev10g1323 217 ProSitePatterns Zinc finger PHD-type signature. 141 186 IPR019786 -
Aev10g1323 217 ProSiteProfiles Zinc finger PHD-type profile. 138 189 IPR019787 -
Aev10g1323 217 PANTHER OS08G0421900 PROTEIN 3 213 - -
Aev10g1323 217 SMART PHD_3 140 187 IPR001965 -
Aev10g1323 217 CDD BAH_BAHCC1 22 156 - -
Aev10g1323 217 PANTHER BNAC03G64850D PROTEIN 3 213 IPR045205 GO:0006325|GO:0035064
Aev10g1323 217 SMART BAH_4 21 136 IPR001025 GO:0003682
Aev10g1323 217 ProSiteProfiles BAH domain profile. 21 136 IPR001025 GO:0003682
Aev10g1323 217 Gene3D - 2 132 IPR043151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1323 Aev-Chr10 16757926 16759768 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1323 31 132 Core DNA Replication Machinery Family AT4G14700 29.126 3.15e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev10g1323 BAH 2.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1323 K25868 - gmx:100800993 414.075