Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1317 ATGATTCACAGTGGACTCTGCAACCTCCGCACGTGCCTCCGCCTACCGGAGACGCCGCTTTTCCGTTCCCCGCCGCTCTCTCTCGCTTCCCGCCGGCGGTTTCTGACCACTGCTACCGCCGCCGGGACGAAGAAGAAAGAGAAGGTGATAGTGATTTCCGGACCAACAGGTTCTGGCAAGAGCCGCTTGGCTCTTGAGCTCGCGAAGCGCCTCAATGGCGAAATCGTCAGCGCCGACTCTGTCCAGGTGTATCGGGGTCTTGATATTGGATCTGCAAAGCCTTCACAACACGATAGAAAGGAGGTACCACATCATCTGGTTGACATACTACACCCTTCTGAAGACTATTCTGTTGGACAGTTTTTTGAGGATGCAAGGCAAACTACAAGAAGTATTCTTGACAAAGGACGTGTTCCCATAGTTGTTGGGGGCACTGGATTGTATTTAAGATGGTTCATATATGGAAAGCCAGATGTGCCTATAGCTTCTCGAGAGATTACATCTAAAGTGCATCAAGAGTTGGCTGAACTACAGAAAAATGAAGATTGGGATGCAGCTGTGCAATTGGTGGTAAACGCAGGTGATCCAAAGGTCCAACAGTTAGCAGTTAATGATTGGTACCGATTACGGCGTAGCCTAGAAATTATTAAGTCCAGTGGATCACCTCCTTCTGCTTTTCGGGTACCATATGATTCTTTCAGGAAACAGGGTGACTGTAGTGTTGCTGATAGTTCTGAGTCATCTCATGTGACGACAATGGAAGAAACCAACTCGACAGATTTAGACTATGAATTTATGTGTTTTTTCCTTTCTGTCCAAAGAGTTGACCTATATAGATCACTGGATTATCGATGTGAAGATATGCTATTAGGAAGGGATGGGATTCTGTCCGAGGCCCAATGGCTTCTTAATATGGGTCTTCTTCCAAATTCCAATTCTGCAACTCGAGCAATTGGTTACAGACAAGCCATGGAGTACATATTAAGATGTAGAGAGCTAGGTGGTGAGAGTTCATTTGGAGAATTTTACAAATTCTTATTTGAATTTCAGAAAGCATCACGGAATTTTGCGAAGAGACAATTGACATGGTTTCGAAATGAACAAATATACCACTGGCTTGATGGTTCTAAACCTCAGGAAACAGTTCTCAACTTTATTCTTGATGCATACCATCATCAGAGTGGAAATCTCGTCGTCCCTGATCATCTAAGAATGTCGAGAGACATTTCTAACCATCGAGAAGCTGCGTTAATCAAGTCTTACCGTCCCAAAAATAGGCATTTCTTGAAGGGGGAAGATTGTTCTCACATTCTGGATTGGATAAGGAAGACTCAAAAAAGAAGTGAAGATTTTCTTTCTGCATCTCCTTGA 1371 0.4427 MIHSGLCNLRTCLRLPETPLFRSPPLSLASRRRFLTTATAAGTKKKEKVIVISGPTGSGKSRLALELAKRLNGEIVSADSVQVYRGLDIGSAKPSQHDRKEVPHHLVDILHPSEDYSVGQFFEDARQTTRSILDKGRVPIVVGGTGLYLRWFIYGKPDVPIASREITSKVHQELAELQKNEDWDAAVQLVVNAGDPKVQQLAVNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFRKQGDCSVADSSESSHVTTMEETNSTDLDYEFMCFFLSVQRVDLYRSLDYRCEDMLLGRDGILSEAQWLLNMGLLPNSNSATRAIGYRQAMEYILRCRELGGESSFGEFYKFLFEFQKASRNFAKRQLTWFRNEQIYHWLDGSKPQETVLNFILDAYHHQSGNLVVPDHLRMSRDISNHREAALIKSYRPKNRHFLKGEDCSHILDWIRKTQKRSEDFLSASP* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1317 456 Pfam IPP transferase 82 367 - -
Aev10g1317 456 Gene3D - 46 426 IPR027417 -
Aev10g1317 456 Gene3D - 158 228 - -
Aev10g1317 456 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 39 446 IPR039657 -
Aev10g1317 456 TIGRFAM miaA: tRNA dimethylallyltransferase 49 226 IPR018022 GO:0008033
Aev10g1317 456 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 9 39 446 - -
Aev10g1317 456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 186 IPR027417 -
Aev10g1317 456 Hamap tRNA dimethylallyltransferase [miaA]. 49 388 IPR018022 GO:0008033
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1317 Aev-Chr10 16683506 16687966 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1317 52 153 C2H2 Transcription Factor Family AT2G27760 36.275 5.06e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1317 K00791 - gmx:100808814 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1317 10 16683506 16687966 Aev10g1317 10 16683506 16687966 ECH