Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1308 ATGTCGCATCCGGGCAAGCCCGTTCCAGAGTTCGACTCGCTCGCCGACCGATTCCGCGACTCAGTGAGTTGCGACTCCAACAACAAGCCAGATTTCCGCGAACTCGATCTGGGCTCGCCCGTCTCGCCGCTCCGGACCCGCCACAGTGGCGGTGGAGTAGCAGGAGGTCCTGCCGCCAGCAGCAGCTCCAGCTCATCCGGATCCTTTTCGGGTCGAACCGGACCCAACCCGGTTTCTAGAAGATCCGATTCAGGACCTAACACCAACAACAACAATGGTAACAACAACCACTCCGGTGAGCTTTCAGGTTCAAGTGAGAACAGCCCCACCGCCACCGGAGGCGGAGCTGGGAATGCACGGGTTTCGAAACAGGGTCAAGCGAGATCCGAGTCGATCTATTCGGGTCAAAACGGCTCCTCTTCATCCTCGTCCTCCGCCGTGAATTCGCCGCCGCTGAACGTCCTCCCTACCGGAAACATCTGCCCCTCTGGCCGGATCCTGAAGACTGGCATGGCGGCGAATCGGAGCTCAAGAAGCGATATCCTTGGTTCAGGAACAGGGAATTACGGCCATGGCAGCATAATTCGCGGCGGTGGCAAGGCCAGCGACTCGGCTCACCCGCCGAGTTTGAGGGCAGTCGGTGGCATTGGTGGCGACGGCAATGTGGGGAAGAGGGCAGTGCAGGGTGTGGATCCGGAGGAGCTGAAGAAGGTTGGGAATGAGCATTACAAGAGAGGGCATTTTGCTGAGGCTTTGGGGATGTATGATCGGGCAATCGCCCTTTCTCCGGCCAGCGCCGCGTACCGGAGCAACCGCGCCGCGGCTCTTACTGGGCTTGGGAGGCTTGGGGAGGCAGTGAGGGAGTGTGAGGAGGCTGTGAGGTTGGATCCTAATTATGGCAGGGCACATCATCGCTTGGCATCGCTTTTCCTAAGGTTGGGACAAGTTGAGAATGCAAGGATGCACCTTTGTTACCCTGGGATGCACCCGGATCCAAGTGAGATGCAGAAGTTACAAGCTGTGGAAAAGCATATCAGCAAATGTGGTGATGTCCGGAGGATTAGGGATTGGAAAAGTGTTCTGAGGGAAGTCGATGCTGCCATCGCTTCTGGAGCCGATTCTTGTCCTCAGCTCTTTATGTGTAGAGCAGAGGCCTTTTTGAAGCTCCACCAAATTGATGATGCAGAATCAATTTCTTTACATATTCCAAAATCTGAACCACATACTAATTCCTCTTCTCAAGCAAGGTTTTTTGGGATGCTCTCTGAAGCTTATTCCTACTTTGTTAGAGCTCAGATTGAGATGGCATTGGGAAGGTTTGACAATGCAGTTACAGCAGCTGAGAAAGCCAGTCAAATTGACCCCCGGAATGTCGAAGTTGCTGTGTTGCTCAGCAATGTGAGGATGGTGGCGAGAGCTCGGGTGCGTGGCAATGATCTTTTTAAGTCTGAAAGGTTTACCGAAGCTTGCTCAGCGTATGGAGAAGGCTTGAGGCTGGACCCTTCAAATTCTGTTCTATATTGCAATAGAGCAGCTTGTTGGTTTAAGCTTGGGCAATGGGAAAGATCAATTGAAGACACCAATCAAGCTTTAAGGATCCAGCCGAATTACACTAAAGCTCTTCTTCGAAGGGCTGCATCAAACAGCAAGCTTGAAAGGTGGGAAGAAGCAGTCAAAGACTATGAGGTCTTGCGGAGAGAACTTCCAAATGACACTGAGGTTGCTGAAGCTCTTTTCCATTCACAAGTTGCACTGAAGAAATCACGCGGGGAAGAAGTTCATAATTTAAAATTTGGTGGTGAAGTGGAAGAAGTATCAGGTCTTGAGCAGTTTAGAGCTGCAATATCTTTACCAGGTGTTTCTGTTGTCCATTTTGAAATTGCTTCCAACTCGCAATGCAAGCAAATATCGCCATTTGTGGATACACTGTGTGGAAGATATCCATCCATTAACTTCCTCAAGGTGGATATTCAAGAAAGCCCTACAGTTGCAACCGCAGAGAACGTTAGGATTGTACCGACCTTCAAGATATACAAAAATGGCAGCCGGGTGAAGGAAATCGTGTGCCCTAGTCGAGATATGTTGGAACACTCCGTGAGGCATTACAGTTTTTAG 2115 0.5116 MSHPGKPVPEFDSLADRFRDSVSCDSNNKPDFRELDLGSPVSPLRTRHSGGGVAGGPAASSSSSSSGSFSGRTGPNPVSRRSDSGPNTNNNNGNNNHSGELSGSSENSPTATGGGAGNARVSKQGQARSESIYSGQNGSSSSSSSAVNSPPLNVLPTGNICPSGRILKTGMAANRSSRSDILGSGTGNYGHGSIIRGGGKASDSAHPPSLRAVGGIGGDGNVGKRAVQGVDPEELKKVGNEHYKRGHFAEALGMYDRAIALSPASAAYRSNRAAALTGLGRLGEAVRECEEAVRLDPNYGRAHHRLASLFLRLGQVENARMHLCYPGMHPDPSEMQKLQAVEKHISKCGDVRRIRDWKSVLREVDAAIASGADSCPQLFMCRAEAFLKLHQIDDAESISLHIPKSEPHTNSSSQARFFGMLSEAYSYFVRAQIEMALGRFDNAVTAAEKASQIDPRNVEVAVLLSNVRMVARARVRGNDLFKSERFTEACSAYGEGLRLDPSNSVLYCNRAACWFKLGQWERSIEDTNQALRIQPNYTKALLRRAASNSKLERWEEAVKDYEVLRRELPNDTEVAEALFHSQVALKKSRGEEVHNLKFGGEVEEVSGLEQFRAAISLPGVSVVHFEIASNSQCKQISPFVDTLCGRYPSINFLKVDIQESPTVATAENVRIVPTFKIYKNGSRVKEIVCPSRDMLEHSVRHYSF* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1308 704 Pfam Tetratricopeptide repeat 506 537 IPR001440 GO:0005515
Aev10g1308 704 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN TTL1 11 702 - -
Aev10g1308 704 Pfam Tetratricopeptide repeat 239 298 - -
Aev10g1308 704 MobiDBLite consensus disorder prediction 10 32 - -
Aev10g1308 704 MobiDBLite consensus disorder prediction 193 226 - -
Aev10g1308 704 ProSiteProfiles TPR repeat profile. 504 537 IPR019734 GO:0005515
Aev10g1308 704 SMART tpr_5 538 571 IPR019734 GO:0005515
Aev10g1308 704 SMART tpr_5 504 537 IPR019734 GO:0005515
Aev10g1308 704 SMART tpr_5 266 299 IPR019734 GO:0005515
Aev10g1308 704 SMART tpr_5 470 503 IPR019734 GO:0005515
Aev10g1308 704 SMART tpr_5 232 265 IPR019734 GO:0005515
Aev10g1308 704 SMART tpr_5 424 457 IPR019734 GO:0005515
Aev10g1308 704 CDD TRX_family 609 696 - -
Aev10g1308 704 MobiDBLite consensus disorder prediction 1 152 - -
Aev10g1308 704 ProSiteProfiles TPR repeat profile. 424 457 IPR019734 GO:0005515
Aev10g1308 704 ProSiteProfiles TPR repeat profile. 232 265 IPR019734 GO:0005515
Aev10g1308 704 MobiDBLite consensus disorder prediction 56 152 - -
Aev10g1308 704 Pfam Tetratricopeptide repeat 425 457 IPR019734 GO:0005515
Aev10g1308 704 SUPERFAMILY TPR-like 232 460 IPR011990 GO:0005515
Aev10g1308 704 Pfam Thioredoxin 610 695 IPR013766 -
Aev10g1308 704 Gene3D Tetratricopeptide repeat domain 230 590 IPR011990 GO:0005515
Aev10g1308 704 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 11 702 IPR044534 -
Aev10g1308 704 SUPERFAMILY Thioredoxin-like 507 702 IPR036249 -
Aev10g1308 704 Gene3D Glutaredoxin 596 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1308 Aev-Chr10 16611860 16614734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1308 469 614 U-box Gene Family AT3G07370 28.962 9.55e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1308 - - adu:107459775 1136.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1308 10 16611860 16614734 Aev10g1308 10 16611860 16614734 ECH
Aev10g1308 10 16611860 16614734 Aev10g1308 10 16611860 16614734 PCT
Aev10g1308 10 16611860 16614734 Aev10g2274 10 22797275 22800349 PCT