Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1292 ATGTCGGGGGCGGGACCCATATCGCAGGATTGGGAGCCAGTGGTGATAAGGAAGAAGGCACCAAACGCAGCGGCGAAGAAGGATGAAAAAGCTGTCAACGCTGCTCGTCGTGCTGGAGCTGAGATTGAAACTCTCAAGAAATCAAATGCTGGAACAAATAGAGCTGCTTCTAGTAGCACTACTTTGAACACTAGGAAGCTTGATGAAGAAACTGAGAATCTTCACCATGAAAGGGTACCAACTGAATTGAAGAAAGCCATCATGCAGGCGCGGCTCGACAAAAAACTTACTCAGGCTCAGCTAGCTCAGATTATCAATGAGAAGCCACAGATTATACAGGAATATGAATCTGGGAAAGCCATTCCAAACCAACAAATCATTGGAAAACTGGAGAGAGCTCTTGGTGCGAAACTGCGCGGAAAGAAATGA 429 0.4639 MSGAGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNRAASSSTTLNTRKLDEETENLHHERVPTELKKAIMQARLDKKLTQAQLAQIINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1292 142 ProSiteProfiles Cro/C1-type HTH domain profile. 87 141 IPR001387 -
Aev10g1292 142 SUPERFAMILY lambda repressor-like DNA-binding domains 81 138 IPR010982 GO:0003677
Aev10g1292 142 CDD HTH_XRE 85 135 IPR001387 -
Aev10g1292 142 PANTHER MULTIPROTEIN BRIDGING FACTOR 1B 1 142 - -
Aev10g1292 142 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 1 142 - -
Aev10g1292 142 MobiDBLite consensus disorder prediction 46 64 - -
Aev10g1292 142 MobiDBLite consensus disorder prediction 43 76 - -
Aev10g1292 142 Pfam Multiprotein bridging factor 1 9 79 IPR013729 -
Aev10g1292 142 Gene3D - 71 142 IPR010982 GO:0003677
Aev10g1292 142 SMART mbf_short4 86 141 IPR001387 -
Aev10g1292 142 Pfam Helix-turn-helix 87 137 IPR001387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1292 Aev-Chr10 16502524 16505142 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Aev10g1292 MBF1 9.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1292 K03627 - qsu:112033276 259.225