Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1272 ATGGAGAATAGTTCTTCTCATCATCATCATTTTTCAAAGGGATCAACAAGAAGGGAAATTATGGAACAAGAGCTAGTAAGAGGGCGTGATATAGCAAATAAGTTACTTGAAGTACTTGTTCATATTTCCTCCAAAAACAACAATAGTAATAATAGTGAAGAAGGGGTAGTAATATTGCCATTTGCTGAAGATCTTGTGCACGAGGTTCTAAGATCATTCACAAATACCCTTTTGCTTTTGAACACTACCATCAATAGTAGTAGTAGTAGTGATGATGTAATCTTCACTACAAGAGATTTCTCCTCTTCTTCCCCTCCCAGTTGTTACCAAAAGCATCATCCTCATGAGGATTTGGATGAGCCACCTTGCAAGACTCGAATAGGGCGATACAAGAGAAAGAACTACTACAGATGCACTTATAAGTATGAGCAGAGTTGCCCTGCAATCAAACAAGTGCAGAGAATTCAAGAGGATCCTCCATTGTATAGAACAACCTATTTTGGTCATCACAATTGCAAAAGCACTTTTAATCAAGAAGTAATTTTGGAACCTGATGATGATTCCTTTTCTGGATCTTCTATGTTCCTTAGCTTCAATAATAACAACATGATCTCTAGCAAGCAACAACAATTTTCATCACCAATTTTTGAATCAACAAAGCAAGAGCCAATGGAAGATCAAGTGATTATTCACGATGATGATGAGCCTATTATTGCTCAAACCAACCAATTTCTCCAATCATCACCAGATAATAATAATAATTACTTCCTATTATGTGATTACTATGATGAAGAACTTGATTTCAATTCATTCTAG 816 0.3578 MENSSSHHHHFSKGSTRREIMEQELVRGRDIANKLLEVLVHISSKNNNSNNSEEGVVILPFAEDLVHEVLRSFTNTLLLLNTTINSSSSSDDVIFTTRDFSSSSPPSCYQKHHPHEDLDEPPCKTRIGRYKRKNYYRCTYKYEQSCPAIKQVQRIQEDPPLYRTTYFGHHNCKSTFNQEVILEPDDDSFSGSSMFLSFNNNNMISSKQQQFSSPIFESTKQEPMEDQVIIHDDDEPIIAQTNQFLQSSPDNNNNYFLLCDYYDEELDFNSF* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1272 271 MobiDBLite consensus disorder prediction 101 120 - -
Aev10g1272 271 Pfam WRKY DNA -binding domain 129 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev10g1272 271 Gene3D WRKY domain 110 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev10g1272 271 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 110 IPR044810 GO:0003700
Aev10g1272 271 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 130 261 IPR044810 GO:0003700
Aev10g1272 271 ProSiteProfiles WRKY domain profile. 128 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev10g1272 271 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 15 110 - -
Aev10g1272 271 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 130 261 - -
Aev10g1272 271 SUPERFAMILY WRKY DNA-binding domain 128 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev10g1272 271 SMART WRKY_cls 124 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1272 Aev-Chr10 16357831 16359614 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1272 20 172 WRKY Transcription Factor Family AT2G46400 27.273 1.73e-13 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev10g1272 WRKY 9.1e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1272 - - aip:107610898 210.69