Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1206 ATGAAGCTGAGAGTGATGAGTCAGTACATGTCACAATGGAGAAGCATAGCAAAAGAAGCATTGGACCGCACAGCCATCACAGCAAAATTCCTCTGCTGGCTTCACGTCACCGACACCTACCTCTGCTCCCCAACTCACGTGTACGGCCCAAGCATGCTCCCAACCCTAAACCTCGCCGGCGACGTCGTTTTGGTAGAGCACGTGTCTCCGCGGATTGGGAAGGTTGCCCATGGCGATTTGGTTATGGTTCGGTCACCCTCCGACCCTAAACGCTGCCTCACGAAACGGGTTGTGGCCATGGAAGGGGACACTGTCACTTACTTTGATCCTATGCGTGACGATGCTACTCAAATTGCAGTTGTGCCAAAGGGGCATGTTTGGATTCAAGGGGATAACATCTATGCATCCCATGATTCACGGCATTTTGGTCCTGTTCCTTATGGTCTAATTCAAGGAAAAGTATTTCTTAGGGTTTGGCCACTTGATAGCTTTGGGCTGCCAGAGTTTATGACCAGTGAAACGCGACAAAGGATACTTCAATGGAGCTTCAGTGGTAAAAGGCATTCGTCCTTGAATGTGGCTGCCTGCAAGGTAAAAGGCATTTAA 606 0.4967 MKLRVMSQYMSQWRSIAKEALDRTAITAKFLCWLHVTDTYLCSPTHVYGPSMLPTLNLAGDVVLVEHVSPRIGKVAHGDLVMVRSPSDPKRCLTKRVVAMEGDTVTYFDPMRDDATQIAVVPKGHVWIQGDNIYASHDSRHFGPVPYGLIQGKVFLRVWPLDSFGLPEFMTSETRQRILQWSFSGKRHSSLNVAACKVKGI* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1206 201 Pfam Signal peptidase, peptidase S26 112 159 IPR019533 GO:0004252|GO:0006465
Aev10g1206 201 Pfam Signal peptidase, peptidase S26 31 108 IPR019533 GO:0004252|GO:0006465
Aev10g1206 201 Gene3D Umud Fragment, subunit A 37 178 - -
Aev10g1206 201 TIGRFAM sigpep_I_bact: signal peptidase I 31 107 IPR000223 GO:0006508|GO:0008236|GO:0016020
Aev10g1206 201 SUPERFAMILY LexA/Signal peptidase 39 167 IPR036286 -
Aev10g1206 201 PRINTS Bacterial leader peptidase 1 (S26A) family signature 93 105 IPR000223 GO:0006508|GO:0008236|GO:0016020
Aev10g1206 201 PRINTS Bacterial leader peptidase 1 (S26A) family signature 121 140 IPR000223 GO:0006508|GO:0008236|GO:0016020
Aev10g1206 201 PRINTS Bacterial leader peptidase 1 (S26A) family signature 40 56 IPR000223 GO:0006508|GO:0008236|GO:0016020
Aev10g1206 201 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 8 165 - -
Aev10g1206 201 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 8 165 - -
Aev10g1206 201 CDD S26_SPase_I 43 154 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1206 Aev-Chr10 15756650 15760020 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1206 52 165 MADS-box Gene Family AT1G29960 50.435 7.14e-38 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1206 K09647 - csin:114274489 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1206 10 15756650 15760020 Aev10g1206 10 15756650 15760020 ECH