LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev10g1186	ATGGAATTTGTGAGACTAATTGTTGGCAACATAACGTCGATATACTCATTTGTTGCGCCGGAGTATAACTACCTCATATCGTATGAGAGTAACGTTGCCAAACTCAAAACCGAGGTTCAGACACTGACGGCCCTAAGGACTGATATGCAACGCAAAGTTGATGATGCTAAGAGAAAAGGGGAAGTTATTAGAGAGTCAGTCGACGACTGGCTTCGTAGAGTTAATGACATGATTGCTGAGTACTCCAATAGTCAAACCAATGAAGAAGTTATTGCTGGCTCCAGCAGCAGCCAAACCAATGAGGAAGGCCACCCAGGCTCAAACAGTCAAAGCAGTGAAGGCCATCCAGACGTTATTAGATGCATGAGCTGGCCATTTGCCTGTCTTTGGCAAAGGCGGAAACGGAGCAAGGAAGCTGAAGAGATGGCACAAAAGGTTTCTACAATCGCTGAGGAAGGAAGATTGCTTCAAACAGATATTTCTTTCCGTGCTCCTTCTCAAATGACAACCTCTTCATTTGCTAGAGGTTATAAAGTGATGGAGTCTAGAACGTCAGTGTTGAACGAGATCAAAGAGGCTTTGAAGGACCCCAACATCTACAAGATTGGGGTGCATGGGATGGGCGGCACTGGCAAGACAACACTGATGAACGAGTTAGCTTGGCAACTGGAGCAAGAAGGATCATCATTTGGTAAAGTAGTTATGGTTACGGTAACCAATAATCTGGATTTTAGAAGAATTTTAAGAATCCAAGGAGAACTTGCTGATAAGTTGTGTCTAAAATTAGAAAGCGAGTCAGAACAAGGAAGAGCAGGGGAATTACGTGGGAGGCTACTCAAGGAGGAGAGTATTGTTGTTATTCTTGATGACATTTGGAATGAGCTGAAATTGGTAGAGTTGGGGGTTCCTTTTGGTGATGACCACAAAGGATGCAAGTTGGTGATGACATCTAGAGATCTTGATCTGCTGAAAAATAATATGGATACTCAAAAAAACGTTGCTCTTAACGTCTTGTCTGAACCAGAAAGTTTGGATTTGTTTGAGAAGACGGCAGGTGATGTTGTTAAACGCCCCGATATAGACCCTATTGCACGTAAGGTGGTCAAATGTTGTTCTGGTTTGCCCCTTTTGATAGTTCTTGTGGCAAAGGCTTTGAAAGGAAAGCAGAATGTCCCCGTGTGGGAAAATTCCTTGAAAACTCTAGTATCAAAGAGAGGTAAACAAATCGATGACGTCATCAAGAAGTTGAGGTTTAGTTATGATTGTCTAGAAAGTGAGGAGCACCGGTCACTATTGTTGCTTATTGGTTCTGTTGGAGAGTATGGTATTGGTCTCCGCAATACTCATGAACTCTTTGCAATGTGTTGGGGGTTGAGCATATATGAAAATGTGAGCACGTTAGAAGAGGCAAGAAATAGGCATTATACATTAATAGCTGGTCTTAGAGCATCCTCATTGTTGCTTGAAGATGGAGCTGATGAACGGCTTTGGATGCATGATGTTGTTCGTGATATGGTTAGATCAGTTGCACGTGATGAACATTCTACCGTGCTATTGGAAAGGTTGACTAGAAGAAATGAAGGGTGGAAGAAAGATCAACTTCAAAATCATCATCGTATCATTCTTCCTCGTTATGATATCAGCGAGCTTCCTGAGAAGTTGGAGTGCCCAGAGTTAAAACTGCTCTTACTTGGTTGTGCTACAGACGAGATACTCCCAGTTCCAGATAACTTTTTCTCAGGAATAACAAAAGTAAATGTTCTTCATTTAAGTGGAAGGGACTACTTTAACAAATCGCTACCTCCATCTCTCTGTCTCTTGACAGAACTTACATCATTGAATCTGTCTGGATTCGAGTTGGAAGACATAAAAATAATAGGAGAACTCAAGAGGTTAGAAATTCTCATCCTTGAAGGAGTAAGGGAACTTGTAATGATCCCAAAAGAGGTAGGAAACCTCACTCATCTGCGGATGCTCAATGTTAGCAACTGCCCACAACTAAGACTCATTGCAAAAAATCTTTTTTCAAACACAAAATACTTGGAAGAGTTGTATTTGTTTAGTTTTTATTTTAATCTCCCGTTGGTGTCGGTTGAGGAAAGCAATTTTGCAAGTCTAGGTGACATAGGAAATTTACATCAGCTAACAACTTTGGAATTAGAAATAGGAATTGCTTTGAATTTTCCATGGAACTTCGGTAACGTTGCAAAGCTAAAAAGATACACGATATGTATCGGATGGAGGTCTAGGCCGCGTGATTTTGTTGCTTTTACTAAATTTTCAAAAAACCTTGCGCTTACGGATTATTTAGACTCACAGAGAAGCATGTTTAACGATCATGGGGTTCAGTTGTTGTTGAAAACAGTTGAAAACTTGTACTTGACTGAATTGGAGCTGTCCTCTCCGATGGTAAATATGGAAGAAATATGCGGTGGACTTCCAACATTTGGCATGTTGAAGTTTATTAAAGTTGATTGCTGCCGTAAAATGAAGAATCTATTCTGGAGTTCCCACGCAAGGCACCTATCTCGACTTCATGAGATGGAAGTTTCTAATTGTAAATCTATGACAGAGATCATAGCTCAGGAAATACAAGGGAGAGAAGAAGTTATTCAGCTCCCTAAATTGCATTCTCTCGTGCTGAGCCACTTGCCTGAACTTCGTAGTTTCTGTTCGATGTCCAATGATCCTAGAGCTCTATTTGATAAGGGTGTAATACGTTTGGTACGCCTCCATATATATGGGGGAACATTTGGAGGAGCAGGCGGGGCTTCAGCTAGTCCAGCCGCAACTTTGAATCACGGATCGGTCTATGTTCATAGGAGACCAGAAGGGGCCATCAGGGACATCGGTATGCAGTACGGCGGAGAAGCATATCAACAGCAAGGGGGCATGCCCCGTCCTGTTGGTGTCAGGCCTCCCACGCCGTATGCACAAAATTGGCAGCCGTAA	2952	0.4211	MEFVRLIVGNITSIYSFVAPEYNYLISYESNVAKLKTEVQTLTALRTDMQRKVDDAKRKGEVIRESVDDWLRRVNDMIAEYSNSQTNEEVIAGSSSSQTNEEGHPGSNSQSSEGHPDVIRCMSWPFACLWQRRKRSKEAEEMAQKVSTIAEEGRLLQTDISFRAPSQMTTSSFARGYKVMESRTSVLNEIKEALKDPNIYKIGVHGMGGTGKTTLMNELAWQLEQEGSSFGKVVMVTVTNNLDFRRILRIQGELADKLCLKLESESEQGRAGELRGRLLKEESIVVILDDIWNELKLVELGVPFGDDHKGCKLVMTSRDLDLLKNNMDTQKNVALNVLSEPESLDLFEKTAGDVVKRPDIDPIARKVVKCCSGLPLLIVLVAKALKGKQNVPVWENSLKTLVSKRGKQIDDVIKKLRFSYDCLESEEHRSLLLLIGSVGEYGIGLRNTHELFAMCWGLSIYENVSTLEEARNRHYTLIAGLRASSLLLEDGADERLWMHDVVRDMVRSVARDEHSTVLLERLTRRNEGWKKDQLQNHHRIILPRYDISELPEKLECPELKLLLLGCATDEILPVPDNFFSGITKVNVLHLSGRDYFNKSLPPSLCLLTELTSLNLSGFELEDIKIIGELKRLEILILEGVRELVMIPKEVGNLTHLRMLNVSNCPQLRLIAKNLFSNTKYLEELYLFSFYFNLPLVSVEESNFASLGDIGNLHQLTTLELEIGIALNFPWNFGNVAKLKRYTICIGWRSRPRDFVAFTKFSKNLALTDYLDSQRSMFNDHGVQLLLKTVENLYLTELELSSPMVNMEEICGGLPTFGMLKFIKVDCCRKMKNLFWSSHARHLSRLHEMEVSNCKSMTEIIAQEIQGREEVIQLPKLHSLVLSHLPELRSFCSMSNDPRALFDKGVIRLVRLHIYGGTFGGAGGASASPAATLNHGSVYVHRRPEGAIRDIGMQYGGEAYQQQGGMPRPVGVRPPTPYAQNWQP*	984

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev10g1186	983	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	181	432	IPR027417	-
	Aev10g1186	983	Gene3D	-	161	337	IPR027417	-
	Aev10g1186	983	PANTHER	-	817	895	-	-
	Aev10g1186	983	SUPERFAMILY	L domain-like	497	895	-	-
	Aev10g1186	983	PANTHER	PHOSPHATASE, PUTATIVE-RELATED	817	895	-	-
	Aev10g1186	983	PANTHER	PHOSPHATASE, PUTATIVE-RELATED	23	798	-	-
	Aev10g1186	983	PRINTS	Disease resistance protein signature	651	667	-	-
	Aev10g1186	983	PRINTS	Disease resistance protein signature	371	385	-	-
	Aev10g1186	983	PRINTS	Disease resistance protein signature	278	292	-	-
	Aev10g1186	983	PRINTS	Disease resistance protein signature	201	216	-	-
	Aev10g1186	983	Coils	Coil	25	59	-	-
	Aev10g1186	983	Gene3D	-	338	424	IPR042197	-
	Aev10g1186	983	SMART	AAA_5	198	338	IPR003593	-
	Aev10g1186	983	MobiDBLite	consensus disorder prediction	961	983	-	-
	Aev10g1186	983	Gene3D	Ribonuclease Inhibitor	534	917	IPR032675	-
	Aev10g1186	983	MobiDBLite	consensus disorder prediction	85	116	-	-
	Aev10g1186	983	PANTHER	-	23	798	-	-
	Aev10g1186	983	Pfam	NB-ARC domain	186	421	IPR002182	GO:0043531
	Aev10g1186	983	CDD	AAA	178	326	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev10g1186	Aev-Chr10	15602813	15608345	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev10g1186	185	668	WRKY Transcription Factor Family	AT5G45050	23.646	1.44e-08	57.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev10g1186	-		-	mtr:MTR_2g072150	572.778